Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7074 | 21445;21446;21447 | chr2:178724039;178724038;178724037 | chr2:179588766;179588765;179588764 |
N2AB | 6757 | 20494;20495;20496 | chr2:178724039;178724038;178724037 | chr2:179588766;179588765;179588764 |
N2A | 5830 | 17713;17714;17715 | chr2:178724039;178724038;178724037 | chr2:179588766;179588765;179588764 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs1456194529 | 0.195 | 0.811 | D | 0.545 | 0.292 | 0.738737919071 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 1.14705E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/L | rs1456194529 | 0.195 | 0.811 | D | 0.545 | 0.292 | 0.738737919071 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/L | rs1456194529 | 0.195 | 0.811 | D | 0.545 | 0.292 | 0.738737919071 | gnomAD-4.0.0 | 6.57125E-06 | None | None | None | None | I | None | 2.41138E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1061 | likely_benign | 0.0991 | benign | -0.428 | Destabilizing | 0.64 | D | 0.321 | neutral | D | 0.526749647 | None | None | I |
S/C | 0.2296 | likely_benign | 0.2445 | benign | -0.444 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | I |
S/D | 0.4453 | ambiguous | 0.4274 | ambiguous | 0.243 | Stabilizing | 0.919 | D | 0.409 | neutral | None | None | None | None | I |
S/E | 0.5198 | ambiguous | 0.5226 | ambiguous | 0.22 | Stabilizing | 0.919 | D | 0.398 | neutral | None | None | None | None | I |
S/F | 0.2443 | likely_benign | 0.2129 | benign | -0.905 | Destabilizing | 0.988 | D | 0.689 | prob.neutral | None | None | None | None | I |
S/G | 0.1993 | likely_benign | 0.1798 | benign | -0.609 | Destabilizing | 0.919 | D | 0.4 | neutral | None | None | None | None | I |
S/H | 0.3897 | ambiguous | 0.3879 | ambiguous | -0.958 | Destabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | I |
S/I | 0.267 | likely_benign | 0.2403 | benign | -0.07 | Destabilizing | 0.976 | D | 0.609 | neutral | None | None | None | None | I |
S/K | 0.6873 | likely_pathogenic | 0.6973 | pathogenic | -0.381 | Destabilizing | 0.919 | D | 0.408 | neutral | None | None | None | None | I |
S/L | 0.1335 | likely_benign | 0.1184 | benign | -0.07 | Destabilizing | 0.811 | D | 0.545 | neutral | D | 0.529328593 | None | None | I |
S/M | 0.2819 | likely_benign | 0.2621 | benign | -0.158 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | I |
S/N | 0.2328 | likely_benign | 0.211 | benign | -0.365 | Destabilizing | 0.919 | D | 0.411 | neutral | None | None | None | None | I |
S/P | 0.7232 | likely_pathogenic | 0.7202 | pathogenic | -0.158 | Destabilizing | 0.984 | D | 0.579 | neutral | D | 0.527869683 | None | None | I |
S/Q | 0.546 | ambiguous | 0.5577 | ambiguous | -0.432 | Destabilizing | 0.988 | D | 0.526 | neutral | None | None | None | None | I |
S/R | 0.5719 | likely_pathogenic | 0.579 | pathogenic | -0.272 | Destabilizing | 0.976 | D | 0.583 | neutral | None | None | None | None | I |
S/T | 0.0885 | likely_benign | 0.0859 | benign | -0.377 | Destabilizing | 0.016 | N | 0.161 | neutral | N | 0.472280444 | None | None | I |
S/V | 0.2458 | likely_benign | 0.2204 | benign | -0.158 | Destabilizing | 0.851 | D | 0.543 | neutral | None | None | None | None | I |
S/W | 0.4245 | ambiguous | 0.379 | ambiguous | -0.974 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
S/Y | 0.2225 | likely_benign | 0.2009 | benign | -0.639 | Destabilizing | 0.996 | D | 0.691 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.