Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7087 | 21484;21485;21486 | chr2:178724000;178723999;178723998 | chr2:179588727;179588726;179588725 |
N2AB | 6770 | 20533;20534;20535 | chr2:178724000;178723999;178723998 | chr2:179588727;179588726;179588725 |
N2A | 5843 | 17752;17753;17754 | chr2:178724000;178723999;178723998 | chr2:179588727;179588726;179588725 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1170087818 | -0.078 | 0.999 | N | 0.747 | 0.385 | 0.615496883321 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 4.64E-05 | 0 | 0 |
G/R | rs1170087818 | -0.078 | 0.999 | N | 0.747 | 0.385 | 0.615496883321 | gnomAD-4.0.0 | 3.1838E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.8826E-05 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1808 | likely_benign | 0.1624 | benign | -0.27 | Destabilizing | 0.998 | D | 0.461 | neutral | N | 0.47814169 | None | None | I |
G/C | 0.3354 | likely_benign | 0.3568 | ambiguous | -0.944 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
G/D | 0.2057 | likely_benign | 0.2011 | benign | -0.352 | Destabilizing | 0.504 | D | 0.42 | neutral | None | None | None | None | I |
G/E | 0.2824 | likely_benign | 0.2849 | benign | -0.508 | Destabilizing | 0.992 | D | 0.561 | neutral | N | 0.464872827 | None | None | I |
G/F | 0.7307 | likely_pathogenic | 0.7334 | pathogenic | -0.955 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/H | 0.4692 | ambiguous | 0.4628 | ambiguous | -0.412 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
G/I | 0.5417 | ambiguous | 0.5594 | ambiguous | -0.43 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
G/K | 0.4954 | ambiguous | 0.5136 | ambiguous | -0.681 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
G/L | 0.5786 | likely_pathogenic | 0.5686 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
G/M | 0.6161 | likely_pathogenic | 0.6071 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
G/N | 0.2787 | likely_benign | 0.2769 | benign | -0.407 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
G/P | 0.9124 | likely_pathogenic | 0.9103 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
G/Q | 0.433 | ambiguous | 0.428 | ambiguous | -0.662 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
G/R | 0.351 | ambiguous | 0.3663 | ambiguous | -0.268 | Destabilizing | 0.999 | D | 0.747 | deleterious | N | 0.479965342 | None | None | I |
G/S | 0.0871 | likely_benign | 0.0793 | benign | -0.587 | Destabilizing | 0.997 | D | 0.521 | neutral | None | None | None | None | I |
G/T | 0.1699 | likely_benign | 0.1664 | benign | -0.665 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
G/V | 0.3525 | ambiguous | 0.3612 | ambiguous | -0.345 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.493398789 | None | None | I |
G/W | 0.5862 | likely_pathogenic | 0.5983 | pathogenic | -1.085 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
G/Y | 0.6148 | likely_pathogenic | 0.616 | pathogenic | -0.744 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.