Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC708721484;21485;21486 chr2:178724000;178723999;178723998chr2:179588727;179588726;179588725
N2AB677020533;20534;20535 chr2:178724000;178723999;178723998chr2:179588727;179588726;179588725
N2A584317752;17753;17754 chr2:178724000;178723999;178723998chr2:179588727;179588726;179588725
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: G
  • RefSeq wild type transcript codon: GGA
  • RefSeq wild type template codon: CCT
  • Domain: Ig-55
  • Domain position: 44
  • Structural Position: 73
  • Q(SASA): 0.8216
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
G/R rs1170087818 -0.078 0.999 N 0.747 0.385 0.615496883321 gnomAD-2.1.1 8.06E-06 None None None None I None 0 0 None 0 0 None 3.27E-05 None 4.64E-05 0 0
G/R rs1170087818 -0.078 0.999 N 0.747 0.385 0.615496883321 gnomAD-4.0.0 3.1838E-06 None None None None I None 0 0 None 0 0 None 1.8826E-05 0 0 1.43295E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
G/A 0.1808 likely_benign 0.1624 benign -0.27 Destabilizing 0.998 D 0.461 neutral N 0.47814169 None None I
G/C 0.3354 likely_benign 0.3568 ambiguous -0.944 Destabilizing 1.0 D 0.803 deleterious None None None None I
G/D 0.2057 likely_benign 0.2011 benign -0.352 Destabilizing 0.504 D 0.42 neutral None None None None I
G/E 0.2824 likely_benign 0.2849 benign -0.508 Destabilizing 0.992 D 0.561 neutral N 0.464872827 None None I
G/F 0.7307 likely_pathogenic 0.7334 pathogenic -0.955 Destabilizing 1.0 D 0.799 deleterious None None None None I
G/H 0.4692 ambiguous 0.4628 ambiguous -0.412 Destabilizing 1.0 D 0.747 deleterious None None None None I
G/I 0.5417 ambiguous 0.5594 ambiguous -0.43 Destabilizing 1.0 D 0.803 deleterious None None None None I
G/K 0.4954 ambiguous 0.5136 ambiguous -0.681 Destabilizing 1.0 D 0.699 prob.neutral None None None None I
G/L 0.5786 likely_pathogenic 0.5686 pathogenic -0.43 Destabilizing 1.0 D 0.779 deleterious None None None None I
G/M 0.6161 likely_pathogenic 0.6071 pathogenic -0.538 Destabilizing 1.0 D 0.796 deleterious None None None None I
G/N 0.2787 likely_benign 0.2769 benign -0.407 Destabilizing 0.999 D 0.653 neutral None None None None I
G/P 0.9124 likely_pathogenic 0.9103 pathogenic -0.345 Destabilizing 1.0 D 0.72 prob.delet. None None None None I
G/Q 0.433 ambiguous 0.428 ambiguous -0.662 Destabilizing 1.0 D 0.747 deleterious None None None None I
G/R 0.351 ambiguous 0.3663 ambiguous -0.268 Destabilizing 0.999 D 0.747 deleterious N 0.479965342 None None I
G/S 0.0871 likely_benign 0.0793 benign -0.587 Destabilizing 0.997 D 0.521 neutral None None None None I
G/T 0.1699 likely_benign 0.1664 benign -0.665 Destabilizing 1.0 D 0.698 prob.neutral None None None None I
G/V 0.3525 ambiguous 0.3612 ambiguous -0.345 Destabilizing 1.0 D 0.771 deleterious N 0.493398789 None None I
G/W 0.5862 likely_pathogenic 0.5983 pathogenic -1.085 Destabilizing 1.0 D 0.762 deleterious None None None None I
G/Y 0.6148 likely_pathogenic 0.616 pathogenic -0.744 Destabilizing 1.0 D 0.797 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.