Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7090 | 21493;21494;21495 | chr2:178723991;178723990;178723989 | chr2:179588718;179588717;179588716 |
N2AB | 6773 | 20542;20543;20544 | chr2:178723991;178723990;178723989 | chr2:179588718;179588717;179588716 |
N2A | 5846 | 17761;17762;17763 | chr2:178723991;178723990;178723989 | chr2:179588718;179588717;179588716 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1560711168 | None | 0.999 | N | 0.697 | 0.561 | 0.754557078919 | gnomAD-4.0.0 | 1.59189E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
Y/N | None | None | 0.896 | D | 0.573 | 0.534 | 0.76754552583 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6651 | likely_pathogenic | 0.6493 | pathogenic | -2.854 | Highly Destabilizing | 0.919 | D | 0.553 | neutral | None | None | None | None | N |
Y/C | 0.2081 | likely_benign | 0.1795 | benign | -1.883 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.500611168 | None | None | N |
Y/D | 0.6294 | likely_pathogenic | 0.6392 | pathogenic | -2.308 | Highly Destabilizing | 0.968 | D | 0.652 | neutral | D | 0.539960004 | None | None | N |
Y/E | 0.7861 | likely_pathogenic | 0.785 | pathogenic | -2.146 | Highly Destabilizing | 0.919 | D | 0.568 | neutral | None | None | None | None | N |
Y/F | 0.137 | likely_benign | 0.1322 | benign | -1.176 | Destabilizing | 0.946 | D | 0.528 | neutral | D | 0.529229805 | None | None | N |
Y/G | 0.5461 | ambiguous | 0.5702 | pathogenic | -3.262 | Highly Destabilizing | 0.919 | D | 0.611 | neutral | None | None | None | None | N |
Y/H | 0.2387 | likely_benign | 0.2172 | benign | -1.771 | Destabilizing | 0.011 | N | 0.144 | neutral | D | 0.523709342 | None | None | N |
Y/I | 0.5229 | ambiguous | 0.5094 | ambiguous | -1.544 | Destabilizing | 0.988 | D | 0.607 | neutral | None | None | None | None | N |
Y/K | 0.7128 | likely_pathogenic | 0.7186 | pathogenic | -1.937 | Destabilizing | 0.976 | D | 0.593 | neutral | None | None | None | None | N |
Y/L | 0.5168 | ambiguous | 0.502 | ambiguous | -1.544 | Destabilizing | 0.919 | D | 0.517 | neutral | None | None | None | None | N |
Y/M | 0.7092 | likely_pathogenic | 0.692 | pathogenic | -1.349 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
Y/N | 0.2865 | likely_benign | 0.2936 | benign | -2.504 | Highly Destabilizing | 0.896 | D | 0.573 | neutral | D | 0.523577269 | None | None | N |
Y/P | 0.9329 | likely_pathogenic | 0.9365 | pathogenic | -1.987 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/Q | 0.6055 | likely_pathogenic | 0.5847 | pathogenic | -2.311 | Highly Destabilizing | 0.976 | D | 0.611 | neutral | None | None | None | None | N |
Y/R | 0.5424 | ambiguous | 0.5358 | ambiguous | -1.619 | Destabilizing | 0.976 | D | 0.616 | neutral | None | None | None | None | N |
Y/S | 0.3738 | ambiguous | 0.3764 | ambiguous | -3.03 | Highly Destabilizing | 0.896 | D | 0.572 | neutral | N | 0.512448 | None | None | N |
Y/T | 0.5785 | likely_pathogenic | 0.5766 | pathogenic | -2.747 | Highly Destabilizing | 0.988 | D | 0.611 | neutral | None | None | None | None | N |
Y/V | 0.4486 | ambiguous | 0.4365 | ambiguous | -1.987 | Destabilizing | 0.959 | D | 0.531 | neutral | None | None | None | None | N |
Y/W | 0.5108 | ambiguous | 0.4903 | ambiguous | -0.603 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.