Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7098 | 21517;21518;21519 | chr2:178723967;178723966;178723965 | chr2:179588694;179588693;179588692 |
N2AB | 6781 | 20566;20567;20568 | chr2:178723967;178723966;178723965 | chr2:179588694;179588693;179588692 |
N2A | 5854 | 17785;17786;17787 | chr2:178723967;178723966;178723965 | chr2:179588694;179588693;179588692 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs878978917 | -0.699 | 0.003 | N | 0.311 | 0.118 | 0.496099317193 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
V/I | rs878978917 | -0.699 | 0.003 | N | 0.311 | 0.118 | 0.496099317193 | gnomAD-4.0.0 | 2.73726E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59838E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.156 | likely_benign | 0.166 | benign | -1.558 | Destabilizing | 0.296 | N | 0.486 | neutral | N | 0.487147587 | None | None | N |
V/C | 0.6308 | likely_pathogenic | 0.6672 | pathogenic | -1.227 | Destabilizing | 0.991 | D | 0.64 | neutral | None | None | None | None | N |
V/D | 0.2493 | likely_benign | 0.2613 | benign | -1.902 | Destabilizing | 0.879 | D | 0.732 | prob.delet. | N | 0.502035838 | None | None | N |
V/E | 0.2374 | likely_benign | 0.2441 | benign | -1.909 | Destabilizing | 0.906 | D | 0.68 | prob.neutral | None | None | None | None | N |
V/F | 0.1131 | likely_benign | 0.1236 | benign | -1.384 | Destabilizing | 0.782 | D | 0.665 | neutral | N | 0.484896316 | None | None | N |
V/G | 0.2086 | likely_benign | 0.2313 | benign | -1.862 | Destabilizing | 0.879 | D | 0.695 | prob.neutral | N | 0.501600487 | None | None | N |
V/H | 0.3613 | ambiguous | 0.3955 | ambiguous | -1.417 | Destabilizing | 0.991 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/I | 0.0653 | likely_benign | 0.0654 | benign | -0.816 | Destabilizing | 0.003 | N | 0.311 | neutral | N | 0.481801218 | None | None | N |
V/K | 0.2681 | likely_benign | 0.3064 | benign | -1.187 | Destabilizing | 0.826 | D | 0.671 | neutral | None | None | None | None | N |
V/L | 0.1393 | likely_benign | 0.1447 | benign | -0.816 | Destabilizing | 0.001 | N | 0.175 | neutral | N | 0.504928793 | None | None | N |
V/M | 0.105 | likely_benign | 0.1035 | benign | -0.632 | Destabilizing | 0.826 | D | 0.569 | neutral | None | None | None | None | N |
V/N | 0.1676 | likely_benign | 0.1858 | benign | -1.062 | Destabilizing | 0.906 | D | 0.748 | deleterious | None | None | None | None | N |
V/P | 0.8776 | likely_pathogenic | 0.9224 | pathogenic | -1.03 | Destabilizing | 0.967 | D | 0.704 | prob.neutral | None | None | None | None | N |
V/Q | 0.2518 | likely_benign | 0.2773 | benign | -1.297 | Destabilizing | 0.967 | D | 0.714 | prob.delet. | None | None | None | None | N |
V/R | 0.2123 | likely_benign | 0.2551 | benign | -0.665 | Destabilizing | 0.906 | D | 0.749 | deleterious | None | None | None | None | N |
V/S | 0.15 | likely_benign | 0.1672 | benign | -1.543 | Destabilizing | 0.704 | D | 0.657 | neutral | None | None | None | None | N |
V/T | 0.1216 | likely_benign | 0.1244 | benign | -1.446 | Destabilizing | 0.018 | N | 0.304 | neutral | None | None | None | None | N |
V/W | 0.6377 | likely_pathogenic | 0.6573 | pathogenic | -1.579 | Destabilizing | 0.991 | D | 0.743 | deleterious | None | None | None | None | N |
V/Y | 0.3467 | ambiguous | 0.3911 | ambiguous | -1.266 | Destabilizing | 0.906 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.