Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7100 | 21523;21524;21525 | chr2:178723961;178723960;178723959 | chr2:179588688;179588687;179588686 |
N2AB | 6783 | 20572;20573;20574 | chr2:178723961;178723960;178723959 | chr2:179588688;179588687;179588686 |
N2A | 5856 | 17791;17792;17793 | chr2:178723961;178723960;178723959 | chr2:179588688;179588687;179588686 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.002 | N | 0.409 | 0.335 | 0.384419519794 | gnomAD-4.0.0 | 3.18371E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71912E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0762 | likely_benign | 0.0751 | benign | -1.046 | Destabilizing | 0.001 | N | 0.194 | neutral | N | 0.50989747 | None | None | N |
T/C | 0.3519 | ambiguous | 0.355 | ambiguous | -0.846 | Destabilizing | 0.836 | D | 0.641 | neutral | None | None | None | None | N |
T/D | 0.4101 | ambiguous | 0.4195 | ambiguous | -1.87 | Destabilizing | 0.418 | N | 0.661 | neutral | None | None | None | None | N |
T/E | 0.2972 | likely_benign | 0.2927 | benign | -1.689 | Destabilizing | 0.418 | N | 0.628 | neutral | None | None | None | None | N |
T/F | 0.1448 | likely_benign | 0.1446 | benign | -0.756 | Destabilizing | 0.002 | N | 0.481 | neutral | None | None | None | None | N |
T/G | 0.2397 | likely_benign | 0.256 | benign | -1.439 | Destabilizing | 0.129 | N | 0.619 | neutral | None | None | None | None | N |
T/H | 0.1768 | likely_benign | 0.1823 | benign | -1.67 | Destabilizing | 0.94 | D | 0.631 | neutral | None | None | None | None | N |
T/I | 0.1012 | likely_benign | 0.1025 | benign | -0.026 | Destabilizing | 0.002 | N | 0.409 | neutral | N | 0.509590826 | None | None | N |
T/K | 0.1719 | likely_benign | 0.1713 | benign | -0.671 | Destabilizing | 0.351 | N | 0.63 | neutral | D | 0.531291462 | None | None | N |
T/L | 0.0744 | likely_benign | 0.0763 | benign | -0.026 | Destabilizing | 0.022 | N | 0.497 | neutral | None | None | None | None | N |
T/M | 0.0741 | likely_benign | 0.0756 | benign | 0.012 | Stabilizing | 0.061 | N | 0.487 | neutral | None | None | None | None | N |
T/N | 0.1196 | likely_benign | 0.1284 | benign | -1.383 | Destabilizing | 0.418 | N | 0.549 | neutral | None | None | None | None | N |
T/P | 0.4906 | ambiguous | 0.5123 | ambiguous | -0.335 | Destabilizing | 0.794 | D | 0.685 | prob.neutral | D | 0.529910826 | None | None | N |
T/Q | 0.1838 | likely_benign | 0.1855 | benign | -1.186 | Destabilizing | 0.836 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/R | 0.1203 | likely_benign | 0.1213 | benign | -0.847 | Destabilizing | 0.655 | D | 0.683 | prob.neutral | N | 0.509012035 | None | None | N |
T/S | 0.0886 | likely_benign | 0.0939 | benign | -1.486 | Destabilizing | 0.007 | N | 0.213 | neutral | N | 0.4584285 | None | None | N |
T/V | 0.0968 | likely_benign | 0.0941 | benign | -0.335 | Destabilizing | 0.001 | N | 0.199 | neutral | None | None | None | None | N |
T/W | 0.4637 | ambiguous | 0.4471 | ambiguous | -0.998 | Destabilizing | 0.983 | D | 0.646 | neutral | None | None | None | None | N |
T/Y | 0.1931 | likely_benign | 0.1832 | benign | -0.596 | Destabilizing | 0.264 | N | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.