Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7102 | 21529;21530;21531 | chr2:178723955;178723954;178723953 | chr2:179588682;179588681;179588680 |
N2AB | 6785 | 20578;20579;20580 | chr2:178723955;178723954;178723953 | chr2:179588682;179588681;179588680 |
N2A | 5858 | 17797;17798;17799 | chr2:178723955;178723954;178723953 | chr2:179588682;179588681;179588680 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.927 | N | 0.512 | 0.238 | 0.290590437066 | gnomAD-4.0.0 | 1.59186E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02535E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2364 | likely_benign | 0.2381 | benign | -0.43 | Destabilizing | 0.495 | N | 0.441 | neutral | None | None | None | None | N |
Q/C | 0.5172 | ambiguous | 0.539 | ambiguous | -0.155 | Destabilizing | 0.995 | D | 0.605 | neutral | None | None | None | None | N |
Q/D | 0.4246 | ambiguous | 0.4542 | ambiguous | -1.288 | Destabilizing | 0.329 | N | 0.486 | neutral | None | None | None | None | N |
Q/E | 0.0922 | likely_benign | 0.0963 | benign | -1.188 | Destabilizing | 0.001 | N | 0.285 | neutral | N | 0.426582653 | None | None | N |
Q/F | 0.5235 | ambiguous | 0.5238 | ambiguous | -0.4 | Destabilizing | 0.893 | D | 0.583 | neutral | None | None | None | None | N |
Q/G | 0.3071 | likely_benign | 0.3315 | benign | -0.76 | Destabilizing | 0.704 | D | 0.555 | neutral | None | None | None | None | N |
Q/H | 0.1464 | likely_benign | 0.1489 | benign | -0.835 | Destabilizing | 0.927 | D | 0.512 | neutral | N | 0.499618974 | None | None | N |
Q/I | 0.2882 | likely_benign | 0.2909 | benign | 0.399 | Stabilizing | 0.543 | D | 0.567 | neutral | None | None | None | None | N |
Q/K | 0.0894 | likely_benign | 0.0933 | benign | -0.166 | Destabilizing | 0.002 | N | 0.328 | neutral | N | 0.442456183 | None | None | N |
Q/L | 0.1063 | likely_benign | 0.1081 | benign | 0.399 | Stabilizing | 0.006 | N | 0.468 | neutral | N | 0.481609217 | None | None | N |
Q/M | 0.3112 | likely_benign | 0.316 | benign | 0.862 | Stabilizing | 0.893 | D | 0.498 | neutral | None | None | None | None | N |
Q/N | 0.2789 | likely_benign | 0.2947 | benign | -0.828 | Destabilizing | 0.704 | D | 0.482 | neutral | None | None | None | None | N |
Q/P | 0.4849 | ambiguous | 0.5448 | ambiguous | 0.153 | Stabilizing | 0.784 | D | 0.541 | neutral | N | 0.50084775 | None | None | N |
Q/R | 0.0882 | likely_benign | 0.0889 | benign | -0.117 | Destabilizing | 0.27 | N | 0.516 | neutral | N | 0.438837087 | None | None | N |
Q/S | 0.2471 | likely_benign | 0.2534 | benign | -0.867 | Destabilizing | 0.495 | N | 0.487 | neutral | None | None | None | None | N |
Q/T | 0.1728 | likely_benign | 0.1749 | benign | -0.585 | Destabilizing | 0.704 | D | 0.53 | neutral | None | None | None | None | N |
Q/V | 0.2148 | likely_benign | 0.2122 | benign | 0.153 | Stabilizing | 0.543 | D | 0.553 | neutral | None | None | None | None | N |
Q/W | 0.3629 | ambiguous | 0.3749 | ambiguous | -0.371 | Destabilizing | 0.995 | D | 0.602 | neutral | None | None | None | None | N |
Q/Y | 0.3019 | likely_benign | 0.312 | benign | -0.015 | Destabilizing | 0.981 | D | 0.561 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.