Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7103 | 21532;21533;21534 | chr2:178723952;178723951;178723950 | chr2:179588679;179588678;179588677 |
N2AB | 6786 | 20581;20582;20583 | chr2:178723952;178723951;178723950 | chr2:179588679;179588678;179588677 |
N2A | 5859 | 17800;17801;17802 | chr2:178723952;178723951;178723950 | chr2:179588679;179588678;179588677 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs1235519093 | -1.765 | 0.454 | N | 0.43 | 0.111 | 0.421184727016 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
L/M | rs1235519093 | -1.765 | 0.454 | N | 0.43 | 0.111 | 0.421184727016 | gnomAD-4.0.0 | 2.73728E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5984E-06 | 0 | 0 |
L/V | None | None | 0.005 | N | 0.309 | 0.078 | 0.190952846119 | gnomAD-4.0.0 | 6.84319E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99601E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6435 | likely_pathogenic | 0.6555 | pathogenic | -3.138 | Highly Destabilizing | 0.525 | D | 0.687 | prob.neutral | None | None | None | None | N |
L/C | 0.6778 | likely_pathogenic | 0.6809 | pathogenic | -2.597 | Highly Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
L/D | 0.9734 | likely_pathogenic | 0.9757 | pathogenic | -3.752 | Highly Destabilizing | 0.991 | D | 0.892 | deleterious | None | None | None | None | N |
L/E | 0.8544 | likely_pathogenic | 0.8685 | pathogenic | -3.462 | Highly Destabilizing | 0.974 | D | 0.867 | deleterious | None | None | None | None | N |
L/F | 0.2558 | likely_benign | 0.2594 | benign | -1.861 | Destabilizing | 0.934 | D | 0.697 | prob.neutral | N | 0.487102043 | None | None | N |
L/G | 0.8781 | likely_pathogenic | 0.8866 | pathogenic | -3.726 | Highly Destabilizing | 0.974 | D | 0.854 | deleterious | None | None | None | None | N |
L/H | 0.684 | likely_pathogenic | 0.7088 | pathogenic | -3.215 | Highly Destabilizing | 0.998 | D | 0.885 | deleterious | None | None | None | None | N |
L/I | 0.0836 | likely_benign | 0.0826 | benign | -1.378 | Destabilizing | 0.007 | N | 0.329 | neutral | None | None | None | None | N |
L/K | 0.7777 | likely_pathogenic | 0.7885 | pathogenic | -2.448 | Highly Destabilizing | 0.974 | D | 0.825 | deleterious | None | None | None | None | N |
L/M | 0.138 | likely_benign | 0.1451 | benign | -1.59 | Destabilizing | 0.454 | N | 0.43 | neutral | N | 0.484949222 | None | None | N |
L/N | 0.8646 | likely_pathogenic | 0.872 | pathogenic | -3.043 | Highly Destabilizing | 0.991 | D | 0.89 | deleterious | None | None | None | None | N |
L/P | 0.9504 | likely_pathogenic | 0.9474 | pathogenic | -1.954 | Destabilizing | 0.991 | D | 0.892 | deleterious | None | None | None | None | N |
L/Q | 0.5911 | likely_pathogenic | 0.6202 | pathogenic | -2.78 | Highly Destabilizing | 0.974 | D | 0.877 | deleterious | None | None | None | None | N |
L/R | 0.6602 | likely_pathogenic | 0.6788 | pathogenic | -2.252 | Highly Destabilizing | 0.974 | D | 0.878 | deleterious | None | None | None | None | N |
L/S | 0.8094 | likely_pathogenic | 0.8322 | pathogenic | -3.684 | Highly Destabilizing | 0.966 | D | 0.827 | deleterious | N | 0.513057111 | None | None | N |
L/T | 0.6737 | likely_pathogenic | 0.6998 | pathogenic | -3.241 | Highly Destabilizing | 0.842 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/V | 0.0897 | likely_benign | 0.0917 | benign | -1.954 | Destabilizing | 0.005 | N | 0.309 | neutral | N | 0.440802744 | None | None | N |
L/W | 0.5603 | ambiguous | 0.5767 | pathogenic | -2.285 | Highly Destabilizing | 0.997 | D | 0.871 | deleterious | D | 0.52483149 | None | None | N |
L/Y | 0.6552 | likely_pathogenic | 0.6673 | pathogenic | -2.119 | Highly Destabilizing | 0.974 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.