Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7104 | 21535;21536;21537 | chr2:178723949;178723948;178723947 | chr2:179588676;179588675;179588674 |
N2AB | 6787 | 20584;20585;20586 | chr2:178723949;178723948;178723947 | chr2:179588676;179588675;179588674 |
N2A | 5860 | 17803;17804;17805 | chr2:178723949;178723948;178723947 | chr2:179588676;179588675;179588674 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1684986089 | None | 0.029 | N | 0.095 | 0.144 | 0.124217242631 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
N/S | rs1684986089 | None | 0.029 | N | 0.095 | 0.144 | 0.124217242631 | gnomAD-4.0.0 | 6.57091E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.183 | likely_benign | 0.1747 | benign | -0.576 | Destabilizing | 0.329 | N | 0.368 | neutral | None | None | None | None | N |
N/C | 0.2745 | likely_benign | 0.2642 | benign | 0.185 | Stabilizing | 0.017 | N | 0.341 | neutral | None | None | None | None | N |
N/D | 0.1249 | likely_benign | 0.1222 | benign | -0.611 | Destabilizing | 0.425 | N | 0.251 | neutral | N | 0.510334613 | None | None | N |
N/E | 0.2941 | likely_benign | 0.2779 | benign | -0.619 | Destabilizing | 0.329 | N | 0.219 | neutral | None | None | None | None | N |
N/F | 0.3656 | ambiguous | 0.354 | ambiguous | -0.919 | Destabilizing | 0.981 | D | 0.435 | neutral | None | None | None | None | N |
N/G | 0.2326 | likely_benign | 0.2248 | benign | -0.772 | Destabilizing | 0.495 | N | 0.241 | neutral | None | None | None | None | N |
N/H | 0.0788 | likely_benign | 0.0775 | benign | -0.835 | Destabilizing | 0.927 | D | 0.373 | neutral | N | 0.51172148 | None | None | N |
N/I | 0.1575 | likely_benign | 0.1557 | benign | -0.13 | Destabilizing | 0.927 | D | 0.458 | neutral | N | 0.518628809 | None | None | N |
N/K | 0.1986 | likely_benign | 0.1911 | benign | 0.089 | Stabilizing | 0.023 | N | 0.09 | neutral | N | 0.47435517 | None | None | N |
N/L | 0.1731 | likely_benign | 0.1699 | benign | -0.13 | Destabilizing | 0.704 | D | 0.433 | neutral | None | None | None | None | N |
N/M | 0.2851 | likely_benign | 0.2767 | benign | 0.555 | Stabilizing | 0.944 | D | 0.407 | neutral | None | None | None | None | N |
N/P | 0.4447 | ambiguous | 0.4211 | ambiguous | -0.253 | Destabilizing | 0.007 | N | 0.241 | neutral | None | None | None | None | N |
N/Q | 0.2256 | likely_benign | 0.2182 | benign | -0.673 | Destabilizing | 0.031 | N | 0.192 | neutral | None | None | None | None | N |
N/R | 0.2013 | likely_benign | 0.1951 | benign | 0.26 | Stabilizing | 0.543 | D | 0.211 | neutral | None | None | None | None | N |
N/S | 0.0801 | likely_benign | 0.0788 | benign | -0.323 | Destabilizing | 0.029 | N | 0.095 | neutral | N | 0.426062578 | None | None | N |
N/T | 0.1181 | likely_benign | 0.1119 | benign | -0.185 | Destabilizing | 0.27 | N | 0.225 | neutral | N | 0.49425044 | None | None | N |
N/V | 0.185 | likely_benign | 0.1797 | benign | -0.253 | Destabilizing | 0.704 | D | 0.447 | neutral | None | None | None | None | N |
N/W | 0.638 | likely_pathogenic | 0.6207 | pathogenic | -0.778 | Destabilizing | 0.995 | D | 0.451 | neutral | None | None | None | None | N |
N/Y | 0.1148 | likely_benign | 0.1132 | benign | -0.505 | Destabilizing | 0.975 | D | 0.423 | neutral | D | 0.52366927 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.