Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7115 | 21568;21569;21570 | chr2:178723916;178723915;178723914 | chr2:179588643;179588642;179588641 |
N2AB | 6798 | 20617;20618;20619 | chr2:178723916;178723915;178723914 | chr2:179588643;179588642;179588641 |
N2A | 5871 | 17836;17837;17838 | chr2:178723916;178723915;178723914 | chr2:179588643;179588642;179588641 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.79 | N | 0.468 | 0.358 | 0.418095516054 | gnomAD-4.0.0 | 6.84364E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99658E-07 | 0 | 0 |
T/S | None | None | 0.992 | N | 0.554 | 0.308 | 0.225215365344 | gnomAD-4.0.0 | 1.59209E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8601E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1024 | likely_benign | 0.1003 | benign | -1.323 | Destabilizing | 0.992 | D | 0.589 | neutral | N | 0.49917246 | None | None | N |
T/C | 0.5208 | ambiguous | 0.4973 | ambiguous | -0.758 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/D | 0.5462 | ambiguous | 0.5141 | ambiguous | -1.9 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
T/E | 0.3875 | ambiguous | 0.3632 | ambiguous | -1.612 | Destabilizing | 0.994 | D | 0.646 | neutral | None | None | None | None | N |
T/F | 0.2452 | likely_benign | 0.234 | benign | -0.812 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
T/G | 0.3811 | ambiguous | 0.3598 | ambiguous | -1.769 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
T/H | 0.2812 | likely_benign | 0.2639 | benign | -1.661 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
T/I | 0.1463 | likely_benign | 0.1426 | benign | -0.106 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.493069621 | None | None | N |
T/K | 0.2758 | likely_benign | 0.2517 | benign | -0.184 | Destabilizing | 0.79 | D | 0.468 | neutral | N | 0.455949285 | None | None | N |
T/L | 0.1138 | likely_benign | 0.1122 | benign | -0.106 | Destabilizing | 0.997 | D | 0.633 | neutral | None | None | None | None | N |
T/M | 0.1004 | likely_benign | 0.1035 | benign | -0.392 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/N | 0.2126 | likely_benign | 0.1961 | benign | -1.131 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
T/P | 0.7173 | likely_pathogenic | 0.7057 | pathogenic | -0.485 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | D | 0.538294259 | None | None | N |
T/Q | 0.277 | likely_benign | 0.2719 | benign | -0.713 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/R | 0.1723 | likely_benign | 0.1612 | benign | -0.648 | Destabilizing | 0.995 | D | 0.668 | neutral | N | 0.460784677 | None | None | N |
T/S | 0.1278 | likely_benign | 0.1201 | benign | -1.337 | Destabilizing | 0.992 | D | 0.554 | neutral | N | 0.456999242 | None | None | N |
T/V | 0.1286 | likely_benign | 0.1289 | benign | -0.485 | Destabilizing | 0.997 | D | 0.588 | neutral | None | None | None | None | N |
T/W | 0.6083 | likely_pathogenic | 0.5848 | pathogenic | -1.061 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
T/Y | 0.313 | likely_benign | 0.2931 | benign | -0.64 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.