Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7147 | 21664;21665;21666 | chr2:178723661;178723660;178723659 | chr2:179588388;179588387;179588386 |
N2AB | 6830 | 20713;20714;20715 | chr2:178723661;178723660;178723659 | chr2:179588388;179588387;179588386 |
N2A | 5903 | 17932;17933;17934 | chr2:178723661;178723660;178723659 | chr2:179588388;179588387;179588386 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.549 | D | 0.457 | 0.295 | 0.360565625551 | gnomAD-4.0.0 | 3.23355E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89457E-06 | 0 | 3.0673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.156 | likely_benign | 0.1673 | benign | -0.419 | Destabilizing | 0.004 | N | 0.269 | neutral | D | 0.526056214 | None | None | I |
E/C | 0.8634 | likely_pathogenic | 0.8758 | pathogenic | -0.373 | Destabilizing | 0.977 | D | 0.461 | neutral | None | None | None | None | I |
E/D | 0.1187 | likely_benign | 0.1357 | benign | -0.453 | Destabilizing | 0.002 | N | 0.121 | neutral | N | 0.488135331 | None | None | I |
E/F | 0.72 | likely_pathogenic | 0.7349 | pathogenic | 0.089 | Stabilizing | 0.92 | D | 0.47 | neutral | None | None | None | None | I |
E/G | 0.2315 | likely_benign | 0.2627 | benign | -0.671 | Destabilizing | 0.379 | N | 0.449 | neutral | D | 0.533287733 | None | None | I |
E/H | 0.447 | ambiguous | 0.4692 | ambiguous | 0.455 | Stabilizing | 0.92 | D | 0.44 | neutral | None | None | None | None | I |
E/I | 0.3394 | likely_benign | 0.3575 | ambiguous | 0.231 | Stabilizing | 0.85 | D | 0.483 | neutral | None | None | None | None | I |
E/K | 0.2092 | likely_benign | 0.221 | benign | 0.209 | Stabilizing | 0.549 | D | 0.457 | neutral | D | 0.528768445 | None | None | I |
E/L | 0.372 | ambiguous | 0.396 | ambiguous | 0.231 | Stabilizing | 0.447 | N | 0.485 | neutral | None | None | None | None | I |
E/M | 0.4459 | ambiguous | 0.4629 | ambiguous | 0.152 | Stabilizing | 0.992 | D | 0.449 | neutral | None | None | None | None | I |
E/N | 0.2479 | likely_benign | 0.2698 | benign | -0.426 | Destabilizing | 0.021 | N | 0.239 | neutral | None | None | None | None | I |
E/P | 0.66 | likely_pathogenic | 0.7191 | pathogenic | 0.035 | Stabilizing | 0.92 | D | 0.485 | neutral | None | None | None | None | I |
E/Q | 0.1603 | likely_benign | 0.164 | benign | -0.325 | Destabilizing | 0.712 | D | 0.468 | neutral | N | 0.513108346 | None | None | I |
E/R | 0.3151 | likely_benign | 0.3292 | benign | 0.6 | Stabilizing | 0.85 | D | 0.441 | neutral | None | None | None | None | I |
E/S | 0.2038 | likely_benign | 0.2192 | benign | -0.573 | Destabilizing | 0.059 | N | 0.232 | neutral | None | None | None | None | I |
E/T | 0.2084 | likely_benign | 0.2162 | benign | -0.349 | Destabilizing | 0.447 | N | 0.472 | neutral | None | None | None | None | I |
E/V | 0.1791 | likely_benign | 0.185 | benign | 0.035 | Stabilizing | 0.379 | N | 0.481 | neutral | N | 0.51433771 | None | None | I |
E/W | 0.8704 | likely_pathogenic | 0.88 | pathogenic | 0.352 | Stabilizing | 0.992 | D | 0.605 | neutral | None | None | None | None | I |
E/Y | 0.5864 | likely_pathogenic | 0.6108 | pathogenic | 0.363 | Stabilizing | 0.972 | D | 0.473 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.