Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7148 | 21667;21668;21669 | chr2:178723658;178723657;178723656 | chr2:179588385;179588384;179588383 |
N2AB | 6831 | 20716;20717;20718 | chr2:178723658;178723657;178723656 | chr2:179588385;179588384;179588383 |
N2A | 5904 | 17935;17936;17937 | chr2:178723658;178723657;178723656 | chr2:179588385;179588384;179588383 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | None | D | 0.367 | 0.293 | 0.764626318615 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs778943017 | -0.207 | None | N | 0.159 | 0.205 | 0.258779203287 | gnomAD-2.1.1 | 1.25E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.17E-06 | 3.46141E-04 |
V/I | rs778943017 | -0.207 | None | N | 0.159 | 0.205 | 0.258779203287 | gnomAD-4.0.0 | 8.06975E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.44858E-04 | 2.89051E-06 | 0 | 9.18892E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1628 | likely_benign | 0.17 | benign | -1.982 | Destabilizing | None | N | 0.157 | neutral | N | 0.493389222 | None | None | N |
V/C | 0.7374 | likely_pathogenic | 0.7506 | pathogenic | -1.37 | Destabilizing | 0.935 | D | 0.571 | neutral | None | None | None | None | N |
V/D | 0.4077 | ambiguous | 0.4501 | ambiguous | -2.562 | Highly Destabilizing | 0.555 | D | 0.649 | neutral | None | None | None | None | N |
V/E | 0.3783 | ambiguous | 0.3978 | ambiguous | -2.361 | Highly Destabilizing | 0.317 | N | 0.62 | neutral | D | 0.550981276 | None | None | N |
V/F | 0.1809 | likely_benign | 0.2037 | benign | -1.181 | Destabilizing | 0.38 | N | 0.631 | neutral | None | None | None | None | N |
V/G | 0.2142 | likely_benign | 0.2365 | benign | -2.486 | Highly Destabilizing | None | N | 0.367 | neutral | D | 0.543979837 | None | None | N |
V/H | 0.6806 | likely_pathogenic | 0.7117 | pathogenic | -2.177 | Highly Destabilizing | 0.935 | D | 0.59 | neutral | None | None | None | None | N |
V/I | 0.0882 | likely_benign | 0.0909 | benign | -0.589 | Destabilizing | None | N | 0.159 | neutral | N | 0.497043224 | None | None | N |
V/K | 0.5345 | ambiguous | 0.5468 | ambiguous | -1.914 | Destabilizing | 0.38 | N | 0.625 | neutral | None | None | None | None | N |
V/L | 0.2174 | likely_benign | 0.218 | benign | -0.589 | Destabilizing | 0.009 | N | 0.389 | neutral | N | 0.506299616 | None | None | N |
V/M | 0.1656 | likely_benign | 0.1713 | benign | -0.48 | Destabilizing | 0.38 | N | 0.543 | neutral | None | None | None | None | N |
V/N | 0.3456 | ambiguous | 0.3859 | ambiguous | -2.175 | Highly Destabilizing | 0.555 | D | 0.64 | neutral | None | None | None | None | N |
V/P | 0.8342 | likely_pathogenic | 0.8732 | pathogenic | -1.026 | Destabilizing | 0.555 | D | 0.617 | neutral | None | None | None | None | N |
V/Q | 0.4767 | ambiguous | 0.4983 | ambiguous | -2.056 | Highly Destabilizing | 0.555 | D | 0.619 | neutral | None | None | None | None | N |
V/R | 0.4817 | ambiguous | 0.4907 | ambiguous | -1.627 | Destabilizing | 0.555 | D | 0.652 | neutral | None | None | None | None | N |
V/S | 0.23 | likely_benign | 0.2545 | benign | -2.743 | Highly Destabilizing | 0.081 | N | 0.541 | neutral | None | None | None | None | N |
V/T | 0.1981 | likely_benign | 0.1991 | benign | -2.41 | Highly Destabilizing | 0.149 | N | 0.501 | neutral | None | None | None | None | N |
V/W | 0.8415 | likely_pathogenic | 0.8669 | pathogenic | -1.707 | Destabilizing | 0.935 | D | 0.6 | neutral | None | None | None | None | N |
V/Y | 0.5337 | ambiguous | 0.5716 | pathogenic | -1.305 | Destabilizing | 0.555 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.