Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7166 | 21721;21722;21723 | chr2:178723604;178723603;178723602 | chr2:179588331;179588330;179588329 |
N2AB | 6849 | 20770;20771;20772 | chr2:178723604;178723603;178723602 | chr2:179588331;179588330;179588329 |
N2A | 5922 | 17989;17990;17991 | chr2:178723604;178723603;178723602 | chr2:179588331;179588330;179588329 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs781740874 | -1.555 | 0.997 | N | 0.593 | 0.517 | 0.809359663723 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.57E-05 | 0 |
F/C | rs781740874 | -1.555 | 0.997 | N | 0.593 | 0.517 | 0.809359663723 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/C | rs781740874 | -1.555 | 0.997 | N | 0.593 | 0.517 | 0.809359663723 | gnomAD-4.0.0 | 5.57935E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78229E-06 | 0 | 1.60231E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7927 | likely_pathogenic | 0.8071 | pathogenic | -2.716 | Highly Destabilizing | 0.688 | D | 0.501 | neutral | None | None | None | None | N |
F/C | 0.4455 | ambiguous | 0.4648 | ambiguous | -1.842 | Destabilizing | 0.997 | D | 0.593 | neutral | N | 0.514926307 | None | None | N |
F/D | 0.9719 | likely_pathogenic | 0.9743 | pathogenic | -2.164 | Highly Destabilizing | 0.991 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/E | 0.9644 | likely_pathogenic | 0.9666 | pathogenic | -1.974 | Destabilizing | 0.991 | D | 0.676 | prob.neutral | None | None | None | None | N |
F/G | 0.9129 | likely_pathogenic | 0.923 | pathogenic | -3.156 | Highly Destabilizing | 0.915 | D | 0.663 | neutral | None | None | None | None | N |
F/H | 0.8422 | likely_pathogenic | 0.8516 | pathogenic | -1.47 | Destabilizing | 0.998 | D | 0.604 | neutral | None | None | None | None | N |
F/I | 0.3347 | likely_benign | 0.3618 | ambiguous | -1.312 | Destabilizing | 0.454 | N | 0.479 | neutral | N | 0.507467666 | None | None | N |
F/K | 0.9478 | likely_pathogenic | 0.9557 | pathogenic | -2.017 | Highly Destabilizing | 0.974 | D | 0.683 | prob.neutral | None | None | None | None | N |
F/L | 0.6762 | likely_pathogenic | 0.7138 | pathogenic | -1.312 | Destabilizing | 0.002 | N | 0.129 | neutral | N | 0.448552649 | None | None | N |
F/M | 0.5273 | ambiguous | 0.5514 | ambiguous | -1.089 | Destabilizing | 0.325 | N | 0.347 | neutral | None | None | None | None | N |
F/N | 0.9108 | likely_pathogenic | 0.9184 | pathogenic | -2.318 | Highly Destabilizing | 0.991 | D | 0.687 | prob.neutral | None | None | None | None | N |
F/P | 0.9694 | likely_pathogenic | 0.9712 | pathogenic | -1.786 | Destabilizing | 0.991 | D | 0.687 | prob.neutral | None | None | None | None | N |
F/Q | 0.9073 | likely_pathogenic | 0.9162 | pathogenic | -2.262 | Highly Destabilizing | 0.974 | D | 0.686 | prob.neutral | None | None | None | None | N |
F/R | 0.8847 | likely_pathogenic | 0.901 | pathogenic | -1.497 | Destabilizing | 0.974 | D | 0.675 | prob.neutral | None | None | None | None | N |
F/S | 0.7747 | likely_pathogenic | 0.7887 | pathogenic | -3.125 | Highly Destabilizing | 0.891 | D | 0.603 | neutral | N | 0.512470841 | None | None | N |
F/T | 0.8609 | likely_pathogenic | 0.87 | pathogenic | -2.824 | Highly Destabilizing | 0.915 | D | 0.599 | neutral | None | None | None | None | N |
F/V | 0.3072 | likely_benign | 0.3253 | benign | -1.786 | Destabilizing | 0.454 | N | 0.504 | neutral | N | 0.513393561 | None | None | N |
F/W | 0.6065 | likely_pathogenic | 0.5959 | pathogenic | -0.215 | Destabilizing | 0.998 | D | 0.545 | neutral | None | None | None | None | N |
F/Y | 0.2615 | likely_benign | 0.2535 | benign | -0.625 | Destabilizing | 0.891 | D | 0.535 | neutral | N | 0.488174772 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.