Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7180 | 21763;21764;21765 | chr2:178723562;178723561;178723560 | chr2:179588289;179588288;179588287 |
N2AB | 6863 | 20812;20813;20814 | chr2:178723562;178723561;178723560 | chr2:179588289;179588288;179588287 |
N2A | 5936 | 18031;18032;18033 | chr2:178723562;178723561;178723560 | chr2:179588289;179588288;179588287 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs760549917 | -0.33 | 0.595 | N | 0.413 | 0.34 | 0.395289904662 | gnomAD-2.1.1 | 3.62E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8E-05 | 0 |
G/R | rs760549917 | -0.33 | 0.595 | N | 0.413 | 0.34 | 0.395289904662 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
G/R | rs760549917 | -0.33 | 0.595 | N | 0.413 | 0.34 | 0.395289904662 | gnomAD-4.0.0 | 1.85951E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.56299E-05 | 0 | 2.45845E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1998 | likely_benign | 0.2196 | benign | -0.235 | Destabilizing | 0.978 | D | 0.415 | neutral | N | 0.484889639 | None | None | N |
G/C | 0.4488 | ambiguous | 0.4918 | ambiguous | -0.773 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
G/D | 0.152 | likely_benign | 0.1592 | benign | -0.676 | Destabilizing | 0.998 | D | 0.455 | neutral | None | None | None | None | N |
G/E | 0.2349 | likely_benign | 0.2659 | benign | -0.846 | Destabilizing | 0.997 | D | 0.48 | neutral | N | 0.464049906 | None | None | N |
G/F | 0.7781 | likely_pathogenic | 0.7983 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
G/H | 0.5493 | ambiguous | 0.581 | pathogenic | -0.515 | Destabilizing | 1.0 | D | 0.528 | neutral | None | None | None | None | N |
G/I | 0.5928 | likely_pathogenic | 0.6388 | pathogenic | -0.415 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
G/K | 0.5532 | ambiguous | 0.5994 | pathogenic | -0.821 | Destabilizing | 0.995 | D | 0.483 | neutral | None | None | None | None | N |
G/L | 0.621 | likely_pathogenic | 0.6566 | pathogenic | -0.415 | Destabilizing | 0.998 | D | 0.601 | neutral | None | None | None | None | N |
G/M | 0.6367 | likely_pathogenic | 0.6745 | pathogenic | -0.456 | Destabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | N |
G/N | 0.2782 | likely_benign | 0.2779 | benign | -0.389 | Destabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | N |
G/P | 0.913 | likely_pathogenic | 0.9249 | pathogenic | -0.324 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
G/Q | 0.4737 | ambiguous | 0.5152 | ambiguous | -0.692 | Destabilizing | 0.998 | D | 0.519 | neutral | None | None | None | None | N |
G/R | 0.4509 | ambiguous | 0.4954 | ambiguous | -0.36 | Destabilizing | 0.595 | D | 0.413 | neutral | N | 0.483750777 | None | None | N |
G/S | 0.1136 | likely_benign | 0.1191 | benign | -0.493 | Destabilizing | 0.914 | D | 0.261 | neutral | None | None | None | None | N |
G/T | 0.2031 | likely_benign | 0.2191 | benign | -0.602 | Destabilizing | 0.784 | D | 0.401 | neutral | None | None | None | None | N |
G/V | 0.3808 | ambiguous | 0.4256 | ambiguous | -0.324 | Destabilizing | 0.997 | D | 0.613 | neutral | N | 0.486157087 | None | None | N |
G/W | 0.5458 | ambiguous | 0.5754 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.572 | neutral | None | None | None | None | N |
G/Y | 0.6016 | likely_pathogenic | 0.6292 | pathogenic | -0.838 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.