Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7184 | 21775;21776;21777 | chr2:178723550;178723549;178723548 | chr2:179588277;179588276;179588275 |
N2AB | 6867 | 20824;20825;20826 | chr2:178723550;178723549;178723548 | chr2:179588277;179588276;179588275 |
N2A | 5940 | 18043;18044;18045 | chr2:178723550;178723549;178723548 | chr2:179588277;179588276;179588275 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1366031789 | -1.06 | 0.704 | D | 0.401 | 0.234 | 0.322786055943 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
N/D | rs1366031789 | -1.06 | 0.704 | D | 0.401 | 0.234 | 0.322786055943 | gnomAD-4.0.0 | 6.36876E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73378E-05 | 0 |
N/S | None | None | 0.31 | N | 0.136 | 0.107 | 0.171388866994 | gnomAD-4.0.0 | 1.5922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2638 | likely_benign | 0.2761 | benign | -1.205 | Destabilizing | 0.759 | D | 0.39 | neutral | None | None | None | None | N |
N/C | 0.3584 | ambiguous | 0.3928 | ambiguous | -0.181 | Destabilizing | 0.999 | D | 0.507 | neutral | None | None | None | None | N |
N/D | 0.1231 | likely_benign | 0.13 | benign | -0.542 | Destabilizing | 0.704 | D | 0.401 | neutral | D | 0.525536139 | None | None | N |
N/E | 0.391 | ambiguous | 0.4025 | ambiguous | -0.377 | Destabilizing | 0.17 | N | 0.167 | neutral | None | None | None | None | N |
N/F | 0.5589 | ambiguous | 0.5889 | pathogenic | -0.696 | Destabilizing | 0.991 | D | 0.52 | neutral | None | None | None | None | N |
N/G | 0.3245 | likely_benign | 0.3482 | ambiguous | -1.592 | Destabilizing | 0.863 | D | 0.352 | neutral | None | None | None | None | N |
N/H | 0.1073 | likely_benign | 0.1127 | benign | -0.937 | Destabilizing | 0.996 | D | 0.413 | neutral | N | 0.49427187 | None | None | N |
N/I | 0.2581 | likely_benign | 0.275 | benign | -0.181 | Destabilizing | 0.134 | N | 0.393 | neutral | D | 0.530539314 | None | None | N |
N/K | 0.3463 | ambiguous | 0.3609 | ambiguous | -0.161 | Destabilizing | 0.92 | D | 0.339 | neutral | N | 0.483417371 | None | None | N |
N/L | 0.2972 | likely_benign | 0.3117 | benign | -0.181 | Destabilizing | 0.884 | D | 0.467 | neutral | None | None | None | None | N |
N/M | 0.38 | ambiguous | 0.3929 | ambiguous | 0.166 | Stabilizing | 0.991 | D | 0.476 | neutral | None | None | None | None | N |
N/P | 0.8375 | likely_pathogenic | 0.8579 | pathogenic | -0.494 | Destabilizing | 0.991 | D | 0.439 | neutral | None | None | None | None | N |
N/Q | 0.3492 | ambiguous | 0.3577 | ambiguous | -0.706 | Destabilizing | 0.982 | D | 0.372 | neutral | None | None | None | None | N |
N/R | 0.3144 | likely_benign | 0.3233 | benign | -0.19 | Destabilizing | 0.939 | D | 0.366 | neutral | None | None | None | None | N |
N/S | 0.0805 | likely_benign | 0.0861 | benign | -1.041 | Destabilizing | 0.31 | N | 0.136 | neutral | N | 0.461831377 | None | None | N |
N/T | 0.1497 | likely_benign | 0.1602 | benign | -0.665 | Destabilizing | 0.852 | D | 0.352 | neutral | N | 0.475531393 | None | None | N |
N/V | 0.2736 | likely_benign | 0.2877 | benign | -0.494 | Destabilizing | 0.884 | D | 0.465 | neutral | None | None | None | None | N |
N/W | 0.7384 | likely_pathogenic | 0.7574 | pathogenic | -0.349 | Destabilizing | 0.999 | D | 0.586 | neutral | None | None | None | None | N |
N/Y | 0.1831 | likely_benign | 0.1935 | benign | -0.156 | Destabilizing | 0.996 | D | 0.493 | neutral | N | 0.508649338 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.