Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7191 | 21796;21797;21798 | chr2:178723529;178723528;178723527 | chr2:179588256;179588255;179588254 |
N2AB | 6874 | 20845;20846;20847 | chr2:178723529;178723528;178723527 | chr2:179588256;179588255;179588254 |
N2A | 5947 | 18064;18065;18066 | chr2:178723529;178723528;178723527 | chr2:179588256;179588255;179588254 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1338451033 | None | 0.934 | D | 0.497 | 0.274 | 0.389439708392 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/M | rs1338451033 | None | 0.934 | D | 0.497 | 0.274 | 0.389439708392 | gnomAD-4.0.0 | 6.57246E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4702E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.147 | likely_benign | 0.1431 | benign | -1.497 | Destabilizing | 0.022 | N | 0.12 | neutral | N | 0.488299676 | None | None | N |
V/C | 0.8088 | likely_pathogenic | 0.8031 | pathogenic | -0.959 | Destabilizing | 0.998 | D | 0.519 | neutral | None | None | None | None | N |
V/D | 0.3558 | ambiguous | 0.341 | ambiguous | -1.324 | Destabilizing | 0.842 | D | 0.603 | neutral | None | None | None | None | N |
V/E | 0.2226 | likely_benign | 0.2118 | benign | -1.304 | Destabilizing | 0.801 | D | 0.543 | neutral | N | 0.520338176 | None | None | N |
V/F | 0.1406 | likely_benign | 0.1368 | benign | -1.123 | Destabilizing | 0.949 | D | 0.549 | neutral | None | None | None | None | N |
V/G | 0.2839 | likely_benign | 0.2695 | benign | -1.839 | Destabilizing | 0.669 | D | 0.569 | neutral | N | 0.504024716 | None | None | N |
V/H | 0.4783 | ambiguous | 0.4596 | ambiguous | -1.434 | Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
V/I | 0.0774 | likely_benign | 0.0798 | benign | -0.648 | Destabilizing | 0.016 | N | 0.169 | neutral | None | None | None | None | N |
V/K | 0.2635 | likely_benign | 0.2447 | benign | -1.138 | Destabilizing | 0.728 | D | 0.559 | neutral | None | None | None | None | N |
V/L | 0.1884 | likely_benign | 0.1904 | benign | -0.648 | Destabilizing | 0.454 | N | 0.416 | neutral | N | 0.512201482 | None | None | N |
V/M | 0.1072 | likely_benign | 0.1086 | benign | -0.491 | Destabilizing | 0.934 | D | 0.497 | neutral | D | 0.523938629 | None | None | N |
V/N | 0.2957 | likely_benign | 0.2867 | benign | -0.95 | Destabilizing | 0.949 | D | 0.609 | neutral | None | None | None | None | N |
V/P | 0.8534 | likely_pathogenic | 0.8362 | pathogenic | -0.897 | Destabilizing | 0.974 | D | 0.581 | neutral | None | None | None | None | N |
V/Q | 0.2884 | likely_benign | 0.2703 | benign | -1.097 | Destabilizing | 0.949 | D | 0.589 | neutral | None | None | None | None | N |
V/R | 0.2443 | likely_benign | 0.2237 | benign | -0.691 | Destabilizing | 0.016 | N | 0.498 | neutral | None | None | None | None | N |
V/S | 0.2099 | likely_benign | 0.2057 | benign | -1.509 | Destabilizing | 0.08 | N | 0.309 | neutral | None | None | None | None | N |
V/T | 0.1426 | likely_benign | 0.1398 | benign | -1.379 | Destabilizing | 0.525 | D | 0.442 | neutral | None | None | None | None | N |
V/W | 0.7425 | likely_pathogenic | 0.7256 | pathogenic | -1.358 | Destabilizing | 0.998 | D | 0.646 | neutral | None | None | None | None | N |
V/Y | 0.5051 | ambiguous | 0.4843 | ambiguous | -1.045 | Destabilizing | 0.991 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.