Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7195 | 21808;21809;21810 | chr2:178723517;178723516;178723515 | chr2:179588244;179588243;179588242 |
N2AB | 6878 | 20857;20858;20859 | chr2:178723517;178723516;178723515 | chr2:179588244;179588243;179588242 |
N2A | 5951 | 18076;18077;18078 | chr2:178723517;178723516;178723515 | chr2:179588244;179588243;179588242 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2078794868 | None | 0.993 | D | 0.703 | 0.454 | 0.582232187747 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs2078794868 | None | 0.993 | D | 0.703 | 0.454 | 0.582232187747 | gnomAD-4.0.0 | 6.57134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3611 | ambiguous | 0.3724 | ambiguous | -0.929 | Destabilizing | 0.977 | D | 0.549 | neutral | N | 0.493606048 | None | None | N |
E/C | 0.9449 | likely_pathogenic | 0.9464 | pathogenic | -0.536 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
E/D | 0.5052 | ambiguous | 0.5583 | ambiguous | -1.389 | Destabilizing | 0.977 | D | 0.495 | neutral | N | 0.510508989 | None | None | N |
E/F | 0.9061 | likely_pathogenic | 0.9054 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/G | 0.514 | ambiguous | 0.5516 | ambiguous | -1.379 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | D | 0.525650729 | None | None | N |
E/H | 0.6843 | likely_pathogenic | 0.6836 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/I | 0.5831 | likely_pathogenic | 0.6067 | pathogenic | 0.336 | Stabilizing | 0.998 | D | 0.811 | deleterious | None | None | None | None | N |
E/K | 0.393 | ambiguous | 0.4025 | ambiguous | -1.09 | Destabilizing | 0.117 | N | 0.391 | neutral | N | 0.482908079 | None | None | N |
E/L | 0.6582 | likely_pathogenic | 0.6737 | pathogenic | 0.336 | Stabilizing | 0.995 | D | 0.77 | deleterious | None | None | None | None | N |
E/M | 0.6612 | likely_pathogenic | 0.661 | pathogenic | 0.987 | Stabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
E/N | 0.6616 | likely_pathogenic | 0.6964 | pathogenic | -1.549 | Destabilizing | 0.995 | D | 0.659 | neutral | None | None | None | None | N |
E/P | 0.9884 | likely_pathogenic | 0.9905 | pathogenic | -0.066 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
E/Q | 0.1962 | likely_benign | 0.1989 | benign | -1.287 | Destabilizing | 0.977 | D | 0.584 | neutral | D | 0.535598417 | None | None | N |
E/R | 0.4995 | ambiguous | 0.5066 | ambiguous | -0.879 | Destabilizing | 0.99 | D | 0.649 | neutral | None | None | None | None | N |
E/S | 0.4731 | ambiguous | 0.4962 | ambiguous | -2.064 | Highly Destabilizing | 0.983 | D | 0.525 | neutral | None | None | None | None | N |
E/T | 0.4762 | ambiguous | 0.4961 | ambiguous | -1.67 | Destabilizing | 0.995 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/V | 0.365 | ambiguous | 0.3794 | ambiguous | -0.066 | Destabilizing | 0.997 | D | 0.751 | deleterious | N | 0.495135874 | None | None | N |
E/W | 0.9667 | likely_pathogenic | 0.9652 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/Y | 0.8453 | likely_pathogenic | 0.8469 | pathogenic | -0.049 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.