Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7204 | 21835;21836;21837 | chr2:178723490;178723489;178723488 | chr2:179588217;179588216;179588215 |
N2AB | 6887 | 20884;20885;20886 | chr2:178723490;178723489;178723488 | chr2:179588217;179588216;179588215 |
N2A | 5960 | 18103;18104;18105 | chr2:178723490;178723489;178723488 | chr2:179588217;179588216;179588215 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs780624577 | -0.175 | 0.997 | N | 0.708 | 0.438 | 0.448891444097 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.45E-05 | 0 |
S/R | rs780624577 | -0.175 | 0.997 | N | 0.708 | 0.438 | 0.448891444097 | gnomAD-4.0.0 | 4.79094E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29729E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0896 | likely_benign | 0.0988 | benign | -0.74 | Destabilizing | 0.246 | N | 0.208 | neutral | None | None | None | None | N |
S/C | 0.2323 | likely_benign | 0.2641 | benign | -0.451 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | D | 0.535529459 | None | None | N |
S/D | 0.5126 | ambiguous | 0.5227 | ambiguous | 0.452 | Stabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | N |
S/E | 0.6071 | likely_pathogenic | 0.6258 | pathogenic | 0.432 | Stabilizing | 0.992 | D | 0.497 | neutral | None | None | None | None | N |
S/F | 0.4982 | ambiguous | 0.5794 | pathogenic | -1.024 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
S/G | 0.1056 | likely_benign | 0.1127 | benign | -0.951 | Destabilizing | 0.9 | D | 0.497 | neutral | N | 0.502168104 | None | None | N |
S/H | 0.5866 | likely_pathogenic | 0.6144 | pathogenic | -1.358 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
S/I | 0.3649 | ambiguous | 0.4218 | ambiguous | -0.288 | Destabilizing | 0.997 | D | 0.755 | deleterious | D | 0.526628689 | None | None | N |
S/K | 0.788 | likely_pathogenic | 0.8086 | pathogenic | -0.406 | Destabilizing | 0.983 | D | 0.489 | neutral | None | None | None | None | N |
S/L | 0.1974 | likely_benign | 0.2424 | benign | -0.288 | Destabilizing | 0.983 | D | 0.603 | neutral | None | None | None | None | N |
S/M | 0.3368 | likely_benign | 0.3822 | ambiguous | -0.067 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/N | 0.2118 | likely_benign | 0.2239 | benign | -0.29 | Destabilizing | 0.999 | D | 0.549 | neutral | D | 0.534008522 | None | None | N |
S/P | 0.6281 | likely_pathogenic | 0.6924 | pathogenic | -0.407 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/Q | 0.6376 | likely_pathogenic | 0.6555 | pathogenic | -0.444 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
S/R | 0.6952 | likely_pathogenic | 0.7203 | pathogenic | -0.343 | Destabilizing | 0.997 | D | 0.708 | prob.delet. | N | 0.508662565 | None | None | N |
S/T | 0.1262 | likely_benign | 0.1303 | benign | -0.438 | Destabilizing | 0.978 | D | 0.478 | neutral | N | 0.486595064 | None | None | N |
S/V | 0.3987 | ambiguous | 0.4502 | ambiguous | -0.407 | Destabilizing | 0.983 | D | 0.616 | neutral | None | None | None | None | N |
S/W | 0.6139 | likely_pathogenic | 0.6634 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/Y | 0.3969 | ambiguous | 0.456 | ambiguous | -0.685 | Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.