Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7234 | 21925;21926;21927 | chr2:178723307;178723306;178723305 | chr2:179588034;179588033;179588032 |
N2AB | 6917 | 20974;20975;20976 | chr2:178723307;178723306;178723305 | chr2:179588034;179588033;179588032 |
N2A | 5990 | 18193;18194;18195 | chr2:178723307;178723306;178723305 | chr2:179588034;179588033;179588032 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1243074128 | 0.64 | 0.999 | N | 0.616 | 0.254 | 0.465464902746 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.02E-06 | 0 |
K/E | rs1243074128 | 0.64 | 0.999 | N | 0.616 | 0.254 | 0.465464902746 | gnomAD-4.0.0 | 3.19281E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.73227E-06 | 0 | 0 |
K/R | rs2078749547 | None | 0.999 | N | 0.547 | 0.185 | 0.351180957027 | gnomAD-4.0.0 | 1.59662E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6647 | likely_pathogenic | 0.6997 | pathogenic | -0.364 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | I |
K/C | 0.8475 | likely_pathogenic | 0.8496 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
K/D | 0.7746 | likely_pathogenic | 0.7972 | pathogenic | 0.367 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
K/E | 0.3089 | likely_benign | 0.3484 | ambiguous | 0.437 | Stabilizing | 0.999 | D | 0.616 | neutral | N | 0.488174772 | None | None | I |
K/F | 0.9062 | likely_pathogenic | 0.9106 | pathogenic | -0.239 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
K/G | 0.6783 | likely_pathogenic | 0.7226 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
K/H | 0.3964 | ambiguous | 0.4049 | ambiguous | -0.893 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
K/I | 0.667 | likely_pathogenic | 0.6739 | pathogenic | 0.375 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
K/L | 0.5932 | likely_pathogenic | 0.6157 | pathogenic | 0.375 | Stabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
K/M | 0.4957 | ambiguous | 0.5246 | ambiguous | 0.191 | Stabilizing | 1.0 | D | 0.641 | neutral | N | 0.503952077 | None | None | I |
K/N | 0.6237 | likely_pathogenic | 0.6559 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.493721407 | None | None | I |
K/P | 0.9158 | likely_pathogenic | 0.91 | pathogenic | 0.159 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/Q | 0.1778 | likely_benign | 0.195 | benign | -0.199 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | N | 0.480017563 | None | None | I |
K/R | 0.1012 | likely_benign | 0.1027 | benign | -0.273 | Destabilizing | 0.999 | D | 0.547 | neutral | N | 0.510662687 | None | None | I |
K/S | 0.643 | likely_pathogenic | 0.6883 | pathogenic | -0.775 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | I |
K/T | 0.3828 | ambiguous | 0.4152 | ambiguous | -0.515 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.493908763 | None | None | I |
K/V | 0.6221 | likely_pathogenic | 0.6324 | pathogenic | 0.159 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
K/W | 0.876 | likely_pathogenic | 0.876 | pathogenic | -0.115 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
K/Y | 0.8032 | likely_pathogenic | 0.8099 | pathogenic | 0.184 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.