Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7240 | 21943;21944;21945 | chr2:178723289;178723288;178723287 | chr2:179588016;179588015;179588014 |
N2AB | 6923 | 20992;20993;20994 | chr2:178723289;178723288;178723287 | chr2:179588016;179588015;179588014 |
N2A | 5996 | 18211;18212;18213 | chr2:178723289;178723288;178723287 | chr2:179588016;179588015;179588014 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.096 | D | 0.399 | 0.211 | 0.420939154896 | gnomAD-4.0.0 | 1.59228E-06 | None | None | None | None | N | None | 0 | 2.28781E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0767 | likely_benign | 0.08 | benign | -0.199 | Destabilizing | None | N | 0.086 | neutral | N | 0.485261483 | None | None | N |
S/C | 0.0917 | likely_benign | 0.1048 | benign | -0.263 | Destabilizing | 0.002 | N | 0.207 | neutral | D | 0.523524362 | None | None | N |
S/D | 0.3394 | likely_benign | 0.373 | ambiguous | 0.063 | Stabilizing | 0.124 | N | 0.199 | neutral | None | None | None | None | N |
S/E | 0.439 | ambiguous | 0.4468 | ambiguous | -0.035 | Destabilizing | 0.22 | N | 0.193 | neutral | None | None | None | None | N |
S/F | 0.1256 | likely_benign | 0.1414 | benign | -0.859 | Destabilizing | 0.096 | N | 0.399 | neutral | D | 0.523017383 | None | None | N |
S/G | 0.1225 | likely_benign | 0.1335 | benign | -0.289 | Destabilizing | 0.055 | N | 0.253 | neutral | None | None | None | None | N |
S/H | 0.2295 | likely_benign | 0.2358 | benign | -0.73 | Destabilizing | 0.497 | N | 0.323 | neutral | None | None | None | None | N |
S/I | 0.1254 | likely_benign | 0.1282 | benign | -0.095 | Destabilizing | 0.22 | N | 0.389 | neutral | None | None | None | None | N |
S/K | 0.5382 | ambiguous | 0.5069 | ambiguous | -0.406 | Destabilizing | 0.22 | N | 0.191 | neutral | None | None | None | None | N |
S/L | 0.0897 | likely_benign | 0.0924 | benign | -0.095 | Destabilizing | 0.055 | N | 0.288 | neutral | None | None | None | None | N |
S/M | 0.1811 | likely_benign | 0.1899 | benign | 0.001 | Stabilizing | 0.667 | D | 0.327 | neutral | None | None | None | None | N |
S/N | 0.1278 | likely_benign | 0.1428 | benign | -0.132 | Destabilizing | 0.004 | N | 0.211 | neutral | None | None | None | None | N |
S/P | 0.3053 | likely_benign | 0.3567 | ambiguous | -0.102 | Destabilizing | 0.602 | D | 0.389 | neutral | N | 0.502279782 | None | None | N |
S/Q | 0.3899 | ambiguous | 0.3898 | ambiguous | -0.366 | Destabilizing | 0.667 | D | 0.291 | neutral | None | None | None | None | N |
S/R | 0.4256 | ambiguous | 0.3988 | ambiguous | -0.173 | Destabilizing | 0.22 | N | 0.405 | neutral | None | None | None | None | N |
S/T | 0.0758 | likely_benign | 0.0771 | benign | -0.213 | Destabilizing | 0.003 | N | 0.12 | neutral | N | 0.468141274 | None | None | N |
S/V | 0.1373 | likely_benign | 0.1439 | benign | -0.102 | Destabilizing | 0.124 | N | 0.328 | neutral | None | None | None | None | N |
S/W | 0.1936 | likely_benign | 0.1999 | benign | -0.921 | Destabilizing | 0.002 | N | 0.233 | neutral | None | None | None | None | N |
S/Y | 0.1166 | likely_benign | 0.1268 | benign | -0.609 | Destabilizing | 0.001 | N | 0.194 | neutral | N | 0.494873496 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.