Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7251 | 21976;21977;21978 | chr2:178723256;178723255;178723254 | chr2:179587983;179587982;179587981 |
N2AB | 6934 | 21025;21026;21027 | chr2:178723256;178723255;178723254 | chr2:179587983;179587982;179587981 |
N2A | 6007 | 18244;18245;18246 | chr2:178723256;178723255;178723254 | chr2:179587983;179587982;179587981 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | rs1387731794 | 0.872 | 0.106 | N | 0.791 | 0.125 | 0.241078983079 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.98E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
S/I | rs1387731794 | 0.872 | 0.106 | N | 0.791 | 0.125 | 0.241078983079 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76917E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0807 | likely_benign | 0.0779 | benign | -0.755 | Destabilizing | 0.007 | N | 0.449 | neutral | None | None | None | None | N |
S/C | 0.0858 | likely_benign | 0.0799 | benign | -0.484 | Destabilizing | None | N | 0.533 | neutral | N | 0.259439573 | None | None | N |
S/D | 0.8998 | likely_pathogenic | 0.9023 | pathogenic | -1.729 | Destabilizing | 0.016 | N | 0.561 | neutral | None | None | None | None | N |
S/E | 0.9455 | likely_pathogenic | 0.9468 | pathogenic | -1.478 | Destabilizing | 0.072 | N | 0.587 | neutral | None | None | None | None | N |
S/F | 0.8208 | likely_pathogenic | 0.8334 | pathogenic | -0.383 | Destabilizing | 0.628 | D | 0.804 | deleterious | None | None | None | None | N |
S/G | 0.0528 | likely_benign | 0.0515 | benign | -1.182 | Destabilizing | None | N | 0.307 | neutral | N | 0.4086466 | None | None | N |
S/H | 0.9093 | likely_pathogenic | 0.9124 | pathogenic | -1.462 | Destabilizing | 0.214 | N | 0.759 | deleterious | None | None | None | None | N |
S/I | 0.3147 | likely_benign | 0.3305 | benign | 0.358 | Stabilizing | 0.106 | N | 0.791 | deleterious | N | 0.451973303 | None | None | N |
S/K | 0.9879 | likely_pathogenic | 0.9884 | pathogenic | -0.191 | Destabilizing | 0.038 | N | 0.587 | neutral | None | None | None | None | N |
S/L | 0.3978 | ambiguous | 0.4071 | ambiguous | 0.358 | Stabilizing | 0.072 | N | 0.727 | prob.delet. | None | None | None | None | N |
S/M | 0.4378 | ambiguous | 0.4661 | ambiguous | 0.111 | Stabilizing | 0.628 | D | 0.775 | deleterious | None | None | None | None | N |
S/N | 0.4423 | ambiguous | 0.4598 | ambiguous | -1.088 | Destabilizing | None | N | 0.377 | neutral | N | 0.453533528 | None | None | N |
S/P | 0.9659 | likely_pathogenic | 0.9646 | pathogenic | 0.02 | Stabilizing | 0.136 | N | 0.761 | deleterious | None | None | None | None | N |
S/Q | 0.9399 | likely_pathogenic | 0.94 | pathogenic | -0.652 | Destabilizing | 0.214 | N | 0.679 | prob.neutral | None | None | None | None | N |
S/R | 0.9786 | likely_pathogenic | 0.9794 | pathogenic | -0.761 | Destabilizing | 0.055 | N | 0.734 | prob.delet. | N | 0.490974408 | None | None | N |
S/T | 0.1235 | likely_benign | 0.1371 | benign | -0.648 | Destabilizing | 0.024 | N | 0.592 | neutral | N | 0.46082486 | None | None | N |
S/V | 0.2683 | likely_benign | 0.2813 | benign | 0.02 | Stabilizing | 0.072 | N | 0.735 | prob.delet. | None | None | None | None | N |
S/W | 0.9368 | likely_pathogenic | 0.9365 | pathogenic | -0.826 | Destabilizing | 0.864 | D | 0.819 | deleterious | None | None | None | None | N |
S/Y | 0.7906 | likely_pathogenic | 0.7931 | pathogenic | -0.325 | Destabilizing | 0.628 | D | 0.806 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.