Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7259 | 22000;22001;22002 | chr2:178723232;178723231;178723230 | chr2:179587959;179587958;179587957 |
N2AB | 6942 | 21049;21050;21051 | chr2:178723232;178723231;178723230 | chr2:179587959;179587958;179587957 |
N2A | 6015 | 18268;18269;18270 | chr2:178723232;178723231;178723230 | chr2:179587959;179587958;179587957 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs727505220 | -0.964 | 1.0 | N | 0.747 | 0.346 | 0.602320007227 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
I/M | rs727505220 | -0.964 | 1.0 | N | 0.747 | 0.346 | 0.602320007227 | gnomAD-4.0.0 | 6.84303E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52029E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7112 | likely_pathogenic | 0.7261 | pathogenic | -2.176 | Highly Destabilizing | 0.999 | D | 0.574 | neutral | None | None | None | None | I |
I/C | 0.9035 | likely_pathogenic | 0.886 | pathogenic | -1.601 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
I/D | 0.9852 | likely_pathogenic | 0.9822 | pathogenic | -1.71 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
I/E | 0.9716 | likely_pathogenic | 0.9683 | pathogenic | -1.567 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
I/F | 0.4877 | ambiguous | 0.3649 | ambiguous | -1.298 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.50110124 | None | None | I |
I/G | 0.9522 | likely_pathogenic | 0.9509 | pathogenic | -2.648 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
I/H | 0.9536 | likely_pathogenic | 0.94 | pathogenic | -1.947 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
I/K | 0.9262 | likely_pathogenic | 0.9207 | pathogenic | -1.528 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
I/L | 0.2383 | likely_benign | 0.2421 | benign | -0.869 | Destabilizing | 0.993 | D | 0.444 | neutral | N | 0.494055652 | None | None | I |
I/M | 0.3181 | likely_benign | 0.3099 | benign | -0.89 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.497480389 | None | None | I |
I/N | 0.8565 | likely_pathogenic | 0.8448 | pathogenic | -1.601 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.506381159 | None | None | I |
I/P | 0.8433 | likely_pathogenic | 0.8171 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
I/Q | 0.94 | likely_pathogenic | 0.9316 | pathogenic | -1.581 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
I/R | 0.8859 | likely_pathogenic | 0.8745 | pathogenic | -1.177 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
I/S | 0.8231 | likely_pathogenic | 0.8205 | pathogenic | -2.371 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.483161569 | None | None | I |
I/T | 0.774 | likely_pathogenic | 0.7856 | pathogenic | -2.086 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.487769925 | None | None | I |
I/V | 0.0744 | likely_benign | 0.0785 | benign | -1.279 | Destabilizing | 0.993 | D | 0.416 | neutral | N | 0.507353023 | None | None | I |
I/W | 0.9819 | likely_pathogenic | 0.9701 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
I/Y | 0.8986 | likely_pathogenic | 0.8466 | pathogenic | -1.231 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.