Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7272 | 22039;22040;22041 | chr2:178723193;178723192;178723191 | chr2:179587920;179587919;179587918 |
N2AB | 6955 | 21088;21089;21090 | chr2:178723193;178723192;178723191 | chr2:179587920;179587919;179587918 |
N2A | 6028 | 18307;18308;18309 | chr2:178723193;178723192;178723191 | chr2:179587920;179587919;179587918 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs747710632 | -0.238 | None | N | 0.119 | 0.117 | 0.0297737177859 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 8.93E-06 | 0 |
T/A | rs747710632 | -0.238 | None | N | 0.119 | 0.117 | 0.0297737177859 | gnomAD-4.0.0 | 6.36776E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.65121E-05 | 0 | 2.85928E-06 | 0 | 0 |
T/S | None | None | None | N | 0.092 | 0.088 | 0.0666544352282 | gnomAD-4.0.0 | 1.59194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85928E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0557 | likely_benign | 0.0578 | benign | -0.346 | Destabilizing | None | N | 0.119 | neutral | N | 0.385698823 | None | None | N |
T/C | 0.2599 | likely_benign | 0.264 | benign | -0.179 | Destabilizing | 0.245 | N | 0.327 | neutral | None | None | None | None | N |
T/D | 0.184 | likely_benign | 0.1811 | benign | 0.112 | Stabilizing | 0.018 | N | 0.303 | neutral | None | None | None | None | N |
T/E | 0.1218 | likely_benign | 0.124 | benign | 0.023 | Stabilizing | 0.004 | N | 0.223 | neutral | None | None | None | None | N |
T/F | 0.1507 | likely_benign | 0.1637 | benign | -0.945 | Destabilizing | 0.245 | N | 0.461 | neutral | None | None | None | None | N |
T/G | 0.1204 | likely_benign | 0.1235 | benign | -0.444 | Destabilizing | 0.004 | N | 0.236 | neutral | None | None | None | None | N |
T/H | 0.1076 | likely_benign | 0.1102 | benign | -0.812 | Destabilizing | 0.138 | N | 0.388 | neutral | None | None | None | None | N |
T/I | 0.1018 | likely_benign | 0.1146 | benign | -0.208 | Destabilizing | 0.033 | N | 0.334 | neutral | N | 0.478667699 | None | None | N |
T/K | 0.0936 | likely_benign | 0.0955 | benign | -0.302 | Destabilizing | 0.004 | N | 0.279 | neutral | None | None | None | None | N |
T/L | 0.0702 | likely_benign | 0.0717 | benign | -0.208 | Destabilizing | 0.009 | N | 0.295 | neutral | None | None | None | None | N |
T/M | 0.0762 | likely_benign | 0.0821 | benign | 0.042 | Stabilizing | 0.245 | N | 0.325 | neutral | None | None | None | None | N |
T/N | 0.0839 | likely_benign | 0.0836 | benign | -0.053 | Destabilizing | 0.007 | N | 0.169 | neutral | N | 0.435780926 | None | None | N |
T/P | 0.0492 | likely_benign | 0.047 | benign | -0.228 | Destabilizing | None | N | 0.119 | neutral | N | 0.378330133 | None | None | N |
T/Q | 0.0809 | likely_benign | 0.0827 | benign | -0.303 | Destabilizing | None | N | 0.12 | neutral | None | None | None | None | N |
T/R | 0.076 | likely_benign | 0.0778 | benign | -0.059 | Destabilizing | 0.009 | N | 0.3 | neutral | None | None | None | None | N |
T/S | 0.0745 | likely_benign | 0.076 | benign | -0.237 | Destabilizing | None | N | 0.092 | neutral | N | 0.408591538 | None | None | N |
T/V | 0.0929 | likely_benign | 0.0995 | benign | -0.228 | Destabilizing | 0.009 | N | 0.197 | neutral | None | None | None | None | N |
T/W | 0.3273 | likely_benign | 0.3407 | ambiguous | -0.968 | Destabilizing | 0.788 | D | 0.366 | neutral | None | None | None | None | N |
T/Y | 0.1442 | likely_benign | 0.1491 | benign | -0.67 | Destabilizing | 0.085 | N | 0.451 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.