Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7273 | 22042;22043;22044 | chr2:178723190;178723189;178723188 | chr2:179587917;179587916;179587915 |
N2AB | 6956 | 21091;21092;21093 | chr2:178723190;178723189;178723188 | chr2:179587917;179587916;179587915 |
N2A | 6029 | 18310;18311;18312 | chr2:178723190;178723189;178723188 | chr2:179587917;179587916;179587915 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs768091794 | -0.981 | 0.999 | N | 0.693 | 0.342 | 0.606518698375 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
S/F | rs768091794 | -0.981 | 0.999 | N | 0.693 | 0.342 | 0.606518698375 | gnomAD-4.0.0 | 6.36791E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.10994E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1356 | likely_benign | 0.1247 | benign | -0.221 | Destabilizing | 0.992 | D | 0.368 | neutral | N | 0.477687617 | None | None | N |
S/C | 0.2637 | likely_benign | 0.2173 | benign | -0.171 | Destabilizing | 1.0 | D | 0.625 | neutral | D | 0.526039355 | None | None | N |
S/D | 0.494 | ambiguous | 0.4382 | ambiguous | 0.036 | Stabilizing | 0.997 | D | 0.447 | neutral | None | None | None | None | N |
S/E | 0.7513 | likely_pathogenic | 0.6903 | pathogenic | -0.076 | Destabilizing | 0.997 | D | 0.445 | neutral | None | None | None | None | N |
S/F | 0.4606 | ambiguous | 0.3997 | ambiguous | -0.933 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | N | 0.50768161 | None | None | N |
S/G | 0.1126 | likely_benign | 0.1144 | benign | -0.286 | Destabilizing | 0.994 | D | 0.456 | neutral | None | None | None | None | N |
S/H | 0.6538 | likely_pathogenic | 0.5653 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
S/I | 0.5463 | ambiguous | 0.4455 | ambiguous | -0.181 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/K | 0.8883 | likely_pathogenic | 0.8384 | pathogenic | -0.375 | Destabilizing | 0.997 | D | 0.446 | neutral | None | None | None | None | N |
S/L | 0.1922 | likely_benign | 0.1616 | benign | -0.181 | Destabilizing | 0.997 | D | 0.557 | neutral | None | None | None | None | N |
S/M | 0.3932 | ambiguous | 0.344 | ambiguous | 0.069 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
S/N | 0.2734 | likely_benign | 0.2404 | benign | -0.064 | Destabilizing | 0.997 | D | 0.449 | neutral | None | None | None | None | N |
S/P | 0.7413 | likely_pathogenic | 0.6081 | pathogenic | -0.169 | Destabilizing | 0.999 | D | 0.61 | neutral | N | 0.488981471 | None | None | N |
S/Q | 0.7973 | likely_pathogenic | 0.7414 | pathogenic | -0.337 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
S/R | 0.8476 | likely_pathogenic | 0.7892 | pathogenic | -0.165 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | N |
S/T | 0.1053 | likely_benign | 0.0966 | benign | -0.17 | Destabilizing | 0.992 | D | 0.451 | neutral | N | 0.469356278 | None | None | N |
S/V | 0.4499 | ambiguous | 0.3744 | ambiguous | -0.169 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
S/W | 0.6027 | likely_pathogenic | 0.5262 | ambiguous | -0.986 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
S/Y | 0.4249 | ambiguous | 0.3567 | ambiguous | -0.682 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.496325305 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.