Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7277 | 22054;22055;22056 | chr2:178723178;178723177;178723176 | chr2:179587905;179587904;179587903 |
N2AB | 6960 | 21103;21104;21105 | chr2:178723178;178723177;178723176 | chr2:179587905;179587904;179587903 |
N2A | 6033 | 18322;18323;18324 | chr2:178723178;178723177;178723176 | chr2:179587905;179587904;179587903 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs758247611 | -1.275 | 0.029 | D | 0.295 | 0.157 | None | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 1.24049E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/D | rs758247611 | -1.275 | 0.029 | D | 0.295 | 0.157 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/D | rs758247611 | -1.275 | 0.029 | D | 0.295 | 0.157 | None | gnomAD-4.0.0 | 4.95831E-06 | None | None | None | None | N | None | 1.06815E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1338 | likely_benign | 0.1502 | benign | -0.934 | Destabilizing | 0.007 | N | 0.393 | neutral | None | None | None | None | N |
N/C | 0.1901 | likely_benign | 0.1896 | benign | -0.13 | Destabilizing | 0.001 | N | 0.415 | neutral | None | None | None | None | N |
N/D | 0.1126 | likely_benign | 0.1233 | benign | -0.734 | Destabilizing | 0.029 | N | 0.295 | neutral | D | 0.529307163 | None | None | N |
N/E | 0.2515 | likely_benign | 0.2866 | benign | -0.654 | Destabilizing | 0.038 | N | 0.271 | neutral | None | None | None | None | N |
N/F | 0.3271 | likely_benign | 0.3625 | ambiguous | -0.779 | Destabilizing | 0.356 | N | 0.463 | neutral | None | None | None | None | N |
N/G | 0.1785 | likely_benign | 0.1949 | benign | -1.251 | Destabilizing | 0.016 | N | 0.279 | neutral | None | None | None | None | N |
N/H | 0.0702 | likely_benign | 0.0765 | benign | -0.998 | Destabilizing | 0.295 | N | 0.396 | neutral | N | 0.504238147 | None | None | N |
N/I | 0.1345 | likely_benign | 0.1553 | benign | -0.135 | Destabilizing | 0.171 | N | 0.479 | neutral | N | 0.514916501 | None | None | N |
N/K | 0.1586 | likely_benign | 0.1887 | benign | -0.287 | Destabilizing | 0.012 | N | 0.273 | neutral | N | 0.478299553 | None | None | N |
N/L | 0.1536 | likely_benign | 0.1735 | benign | -0.135 | Destabilizing | 0.038 | N | 0.452 | neutral | None | None | None | None | N |
N/M | 0.2313 | likely_benign | 0.2481 | benign | 0.392 | Stabilizing | 0.628 | D | 0.429 | neutral | None | None | None | None | N |
N/P | 0.7132 | likely_pathogenic | 0.6893 | pathogenic | -0.372 | Destabilizing | None | N | 0.334 | neutral | None | None | None | None | N |
N/Q | 0.1815 | likely_benign | 0.2118 | benign | -1.004 | Destabilizing | 0.072 | N | 0.34 | neutral | None | None | None | None | N |
N/R | 0.1433 | likely_benign | 0.1744 | benign | -0.235 | Destabilizing | None | N | 0.252 | neutral | None | None | None | None | N |
N/S | 0.0576 | likely_benign | 0.061 | benign | -0.938 | Destabilizing | None | N | 0.123 | neutral | N | 0.457252277 | None | None | N |
N/T | 0.0813 | likely_benign | 0.0861 | benign | -0.671 | Destabilizing | 0.001 | N | 0.121 | neutral | N | 0.503544714 | None | None | N |
N/V | 0.1504 | likely_benign | 0.1669 | benign | -0.372 | Destabilizing | 0.072 | N | 0.441 | neutral | None | None | None | None | N |
N/W | 0.5588 | ambiguous | 0.6048 | pathogenic | -0.514 | Destabilizing | 0.864 | D | 0.486 | neutral | None | None | None | None | N |
N/Y | 0.116 | likely_benign | 0.1284 | benign | -0.31 | Destabilizing | 0.295 | N | 0.439 | neutral | N | 0.498280537 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.