Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7284 | 22075;22076;22077 | chr2:178723157;178723156;178723155 | chr2:179587884;179587883;179587882 |
N2AB | 6967 | 21124;21125;21126 | chr2:178723157;178723156;178723155 | chr2:179587884;179587883;179587882 |
N2A | 6040 | 18343;18344;18345 | chr2:178723157;178723156;178723155 | chr2:179587884;179587883;179587882 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.096 | N | 0.491 | 0.326 | 0.464698922459 | gnomAD-4.0.0 | 5.47474E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.6224E-05 | 0 | 4.49788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0968 | likely_benign | 0.106 | benign | -0.986 | Destabilizing | 0.019 | N | 0.317 | neutral | N | 0.520340963 | None | None | N |
T/C | 0.5368 | ambiguous | 0.5641 | pathogenic | -0.699 | Destabilizing | 0.667 | D | 0.54 | neutral | None | None | None | None | N |
T/D | 0.5003 | ambiguous | 0.546 | ambiguous | -0.932 | Destabilizing | 0.22 | N | 0.475 | neutral | None | None | None | None | N |
T/E | 0.455 | ambiguous | 0.5134 | ambiguous | -0.867 | Destabilizing | 0.055 | N | 0.451 | neutral | None | None | None | None | N |
T/F | 0.2734 | likely_benign | 0.3317 | benign | -0.914 | Destabilizing | 0.497 | N | 0.561 | neutral | None | None | None | None | N |
T/G | 0.2834 | likely_benign | 0.3097 | benign | -1.301 | Destabilizing | 0.055 | N | 0.475 | neutral | None | None | None | None | N |
T/H | 0.298 | likely_benign | 0.3366 | benign | -1.595 | Destabilizing | 0.667 | D | 0.559 | neutral | None | None | None | None | N |
T/I | 0.2745 | likely_benign | 0.3194 | benign | -0.214 | Destabilizing | 0.096 | N | 0.491 | neutral | N | 0.508238457 | None | None | N |
T/K | 0.3236 | likely_benign | 0.3703 | ambiguous | -0.803 | Destabilizing | None | N | 0.227 | neutral | None | None | None | None | N |
T/L | 0.1575 | likely_benign | 0.1791 | benign | -0.214 | Destabilizing | None | N | 0.23 | neutral | None | None | None | None | N |
T/M | 0.1114 | likely_benign | 0.1237 | benign | 0.065 | Stabilizing | 0.497 | N | 0.557 | neutral | None | None | None | None | N |
T/N | 0.1247 | likely_benign | 0.1432 | benign | -1.006 | Destabilizing | 0.096 | N | 0.392 | neutral | D | 0.527170935 | None | None | N |
T/P | 0.6731 | likely_pathogenic | 0.7062 | pathogenic | -0.439 | Destabilizing | 0.301 | N | 0.539 | neutral | N | 0.505179844 | None | None | N |
T/Q | 0.3161 | likely_benign | 0.3457 | ambiguous | -1.1 | Destabilizing | 0.22 | N | 0.541 | neutral | None | None | None | None | N |
T/R | 0.2467 | likely_benign | 0.2842 | benign | -0.678 | Destabilizing | 0.124 | N | 0.485 | neutral | None | None | None | None | N |
T/S | 0.0883 | likely_benign | 0.1002 | benign | -1.236 | Destabilizing | None | N | 0.171 | neutral | N | 0.408132965 | None | None | N |
T/V | 0.2278 | likely_benign | 0.2549 | benign | -0.439 | Destabilizing | 0.055 | N | 0.374 | neutral | None | None | None | None | N |
T/W | 0.6609 | likely_pathogenic | 0.7123 | pathogenic | -0.91 | Destabilizing | 0.958 | D | 0.561 | neutral | None | None | None | None | N |
T/Y | 0.2489 | likely_benign | 0.2836 | benign | -0.63 | Destabilizing | 0.667 | D | 0.554 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.