Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7286 | 22081;22082;22083 | chr2:178723151;178723150;178723149 | chr2:179587878;179587877;179587876 |
N2AB | 6969 | 21130;21131;21132 | chr2:178723151;178723150;178723149 | chr2:179587878;179587877;179587876 |
N2A | 6042 | 18349;18350;18351 | chr2:178723151;178723150;178723149 | chr2:179587878;179587877;179587876 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1434099856 | None | 0.219 | N | 0.247 | 0.065 | 0.420199648628 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1434099856 | None | 0.219 | N | 0.247 | 0.065 | 0.420199648628 | gnomAD-4.0.0 | 2.56307E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.56961E-05 | 0 | 2.39389E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6136 | likely_pathogenic | 0.727 | pathogenic | -2.501 | Highly Destabilizing | 0.964 | D | 0.573 | neutral | None | None | None | None | N |
I/C | 0.8277 | likely_pathogenic | 0.8535 | pathogenic | -1.83 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
I/D | 0.9164 | likely_pathogenic | 0.9479 | pathogenic | -2.741 | Highly Destabilizing | 0.998 | D | 0.746 | deleterious | None | None | None | None | N |
I/E | 0.7936 | likely_pathogenic | 0.8726 | pathogenic | -2.562 | Highly Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
I/F | 0.2128 | likely_benign | 0.2811 | benign | -1.514 | Destabilizing | 0.997 | D | 0.564 | neutral | N | 0.501479634 | None | None | N |
I/G | 0.867 | likely_pathogenic | 0.9168 | pathogenic | -3.008 | Highly Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/H | 0.5837 | likely_pathogenic | 0.7019 | pathogenic | -2.414 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
I/K | 0.487 | ambiguous | 0.6423 | pathogenic | -1.847 | Destabilizing | 0.998 | D | 0.746 | deleterious | None | None | None | None | N |
I/L | 0.1636 | likely_benign | 0.1941 | benign | -1.057 | Destabilizing | 0.817 | D | 0.458 | neutral | N | 0.485590651 | None | None | N |
I/M | 0.161 | likely_benign | 0.1958 | benign | -1.019 | Destabilizing | 0.997 | D | 0.575 | neutral | N | 0.496555336 | None | None | N |
I/N | 0.5256 | ambiguous | 0.6472 | pathogenic | -2.06 | Highly Destabilizing | 0.997 | D | 0.761 | deleterious | N | 0.482134384 | None | None | N |
I/P | 0.9833 | likely_pathogenic | 0.9852 | pathogenic | -1.518 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
I/Q | 0.573 | likely_pathogenic | 0.6877 | pathogenic | -2.005 | Highly Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
I/R | 0.3296 | likely_benign | 0.4665 | ambiguous | -1.479 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
I/S | 0.4786 | ambiguous | 0.6028 | pathogenic | -2.752 | Highly Destabilizing | 0.961 | D | 0.64 | neutral | N | 0.509427749 | None | None | N |
I/T | 0.4309 | ambiguous | 0.5862 | pathogenic | -2.436 | Highly Destabilizing | 0.4 | N | 0.421 | neutral | N | 0.47215744 | None | None | N |
I/V | 0.1212 | likely_benign | 0.1483 | benign | -1.518 | Destabilizing | 0.219 | N | 0.247 | neutral | N | 0.488689904 | None | None | N |
I/W | 0.8298 | likely_pathogenic | 0.8583 | pathogenic | -1.871 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
I/Y | 0.5662 | likely_pathogenic | 0.6219 | pathogenic | -1.609 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.