Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7289 | 22090;22091;22092 | chr2:178723142;178723141;178723140 | chr2:179587869;179587868;179587867 |
N2AB | 6972 | 21139;21140;21141 | chr2:178723142;178723141;178723140 | chr2:179587869;179587868;179587867 |
N2A | 6045 | 18358;18359;18360 | chr2:178723142;178723141;178723140 | chr2:179587869;179587868;179587867 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.81 | D | 0.642 | 0.616 | 0.709904841857 | gnomAD-4.0.0 | 6.84322E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99564E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9252 | likely_pathogenic | 0.9185 | pathogenic | -2.684 | Highly Destabilizing | 0.25 | N | 0.565 | neutral | None | None | None | None | N |
I/C | 0.9179 | likely_pathogenic | 0.9056 | pathogenic | -2.21 | Highly Destabilizing | 0.005 | N | 0.493 | neutral | None | None | None | None | N |
I/D | 0.9794 | likely_pathogenic | 0.9775 | pathogenic | -2.812 | Highly Destabilizing | 0.972 | D | 0.809 | deleterious | None | None | None | None | N |
I/E | 0.9688 | likely_pathogenic | 0.9636 | pathogenic | -2.656 | Highly Destabilizing | 0.92 | D | 0.799 | deleterious | None | None | None | None | N |
I/F | 0.2689 | likely_benign | 0.2497 | benign | -1.71 | Destabilizing | 0.004 | N | 0.362 | neutral | D | 0.563202427 | None | None | N |
I/G | 0.9757 | likely_pathogenic | 0.9737 | pathogenic | -3.179 | Highly Destabilizing | 0.766 | D | 0.784 | deleterious | None | None | None | None | N |
I/H | 0.9122 | likely_pathogenic | 0.8961 | pathogenic | -2.393 | Highly Destabilizing | 0.992 | D | 0.831 | deleterious | None | None | None | None | N |
I/K | 0.9233 | likely_pathogenic | 0.9094 | pathogenic | -2.073 | Highly Destabilizing | 0.92 | D | 0.795 | deleterious | None | None | None | None | N |
I/L | 0.2283 | likely_benign | 0.2304 | benign | -1.281 | Destabilizing | 0.099 | N | 0.382 | neutral | D | 0.549371216 | None | None | N |
I/M | 0.2185 | likely_benign | 0.2176 | benign | -1.258 | Destabilizing | 0.81 | D | 0.642 | neutral | D | 0.604588456 | None | None | N |
I/N | 0.7844 | likely_pathogenic | 0.7674 | pathogenic | -2.256 | Highly Destabilizing | 0.963 | D | 0.831 | deleterious | D | 0.638039808 | None | None | N |
I/P | 0.9943 | likely_pathogenic | 0.9929 | pathogenic | -1.727 | Destabilizing | 0.972 | D | 0.831 | deleterious | None | None | None | None | N |
I/Q | 0.9353 | likely_pathogenic | 0.927 | pathogenic | -2.261 | Highly Destabilizing | 0.972 | D | 0.834 | deleterious | None | None | None | None | N |
I/R | 0.8917 | likely_pathogenic | 0.8799 | pathogenic | -1.568 | Destabilizing | 0.92 | D | 0.832 | deleterious | None | None | None | None | N |
I/S | 0.8851 | likely_pathogenic | 0.8824 | pathogenic | -2.999 | Highly Destabilizing | 0.549 | D | 0.731 | prob.delet. | D | 0.638039808 | None | None | N |
I/T | 0.9033 | likely_pathogenic | 0.8918 | pathogenic | -2.703 | Highly Destabilizing | 0.549 | D | 0.651 | neutral | D | 0.605597477 | None | None | N |
I/V | 0.1652 | likely_benign | 0.1479 | benign | -1.727 | Destabilizing | 0.002 | N | 0.265 | neutral | D | 0.57046665 | None | None | N |
I/W | 0.9313 | likely_pathogenic | 0.9196 | pathogenic | -1.957 | Destabilizing | 0.992 | D | 0.827 | deleterious | None | None | None | None | N |
I/Y | 0.6981 | likely_pathogenic | 0.6828 | pathogenic | -1.745 | Destabilizing | 0.739 | D | 0.742 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.