Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7290 | 22093;22094;22095 | chr2:178723139;178723138;178723137 | chr2:179587866;179587865;179587864 |
N2AB | 6973 | 21142;21143;21144 | chr2:178723139;178723138;178723137 | chr2:179587866;179587865;179587864 |
N2A | 6046 | 18361;18362;18363 | chr2:178723139;178723138;178723137 | chr2:179587866;179587865;179587864 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 0.864 | N | 0.665 | 0.249 | 0.534814951121 | gnomAD-4.0.0 | 6.84321E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9956E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.129 | likely_benign | 0.1151 | benign | -1.173 | Destabilizing | 0.547 | D | 0.458 | neutral | None | None | None | None | N |
L/C | 0.3305 | likely_benign | 0.2773 | benign | -0.775 | Destabilizing | 0.985 | D | 0.667 | neutral | None | None | None | None | N |
L/D | 0.3718 | ambiguous | 0.3236 | benign | -0.625 | Destabilizing | 0.945 | D | 0.749 | deleterious | None | None | None | None | N |
L/E | 0.181 | likely_benign | 0.1602 | benign | -0.695 | Destabilizing | 0.945 | D | 0.746 | deleterious | None | None | None | None | N |
L/F | 0.0941 | likely_benign | 0.0853 | benign | -1.121 | Destabilizing | 0.894 | D | 0.668 | neutral | None | None | None | None | N |
L/G | 0.2594 | likely_benign | 0.2266 | benign | -1.403 | Destabilizing | 0.945 | D | 0.738 | prob.delet. | None | None | None | None | N |
L/H | 0.113 | likely_benign | 0.0991 | benign | -0.663 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/I | 0.0733 | likely_benign | 0.0726 | benign | -0.66 | Destabilizing | 0.031 | N | 0.273 | neutral | None | None | None | None | N |
L/K | 0.1275 | likely_benign | 0.1177 | benign | -0.577 | Destabilizing | 0.945 | D | 0.716 | prob.delet. | None | None | None | None | N |
L/M | 0.1023 | likely_benign | 0.0985 | benign | -0.414 | Destabilizing | 0.864 | D | 0.665 | neutral | N | 0.490492176 | None | None | N |
L/N | 0.1797 | likely_benign | 0.1528 | benign | -0.321 | Destabilizing | 0.981 | D | 0.741 | deleterious | None | None | None | None | N |
L/P | 0.1004 | likely_benign | 0.0868 | benign | -0.798 | Destabilizing | 0.975 | D | 0.75 | deleterious | N | 0.476723472 | None | None | N |
L/Q | 0.0803 | likely_benign | 0.0753 | benign | -0.608 | Destabilizing | 0.975 | D | 0.725 | prob.delet. | N | 0.500944339 | None | None | N |
L/R | 0.0908 | likely_benign | 0.087 | benign | 0.036 | Stabilizing | 0.928 | D | 0.735 | prob.delet. | N | 0.495615877 | None | None | N |
L/S | 0.1207 | likely_benign | 0.1075 | benign | -0.886 | Destabilizing | 0.894 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/T | 0.1125 | likely_benign | 0.1005 | benign | -0.844 | Destabilizing | 0.894 | D | 0.597 | neutral | None | None | None | None | N |
L/V | 0.076 | likely_benign | 0.0732 | benign | -0.798 | Destabilizing | 0.006 | N | 0.277 | neutral | N | 0.51181748 | None | None | N |
L/W | 0.1337 | likely_benign | 0.1277 | benign | -1.107 | Destabilizing | 0.995 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/Y | 0.1958 | likely_benign | 0.1758 | benign | -0.847 | Destabilizing | 0.945 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.