Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7303 | 22132;22133;22134 | chr2:178723100;178723099;178723098 | chr2:179587827;179587826;179587825 |
N2AB | 6986 | 21181;21182;21183 | chr2:178723100;178723099;178723098 | chr2:179587827;179587826;179587825 |
N2A | 6059 | 18400;18401;18402 | chr2:178723100;178723099;178723098 | chr2:179587827;179587826;179587825 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.549 | N | 0.646 | 0.391 | 0.49179695788 | gnomAD-4.0.0 | 3.18351E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71817E-06 | 0 | 0 |
E/K | rs774950387 | -1.245 | 0.084 | N | 0.275 | 0.221 | 0.332133492242 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
E/K | rs774950387 | -1.245 | 0.084 | N | 0.275 | 0.221 | 0.332133492242 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs774950387 | -1.245 | 0.084 | N | 0.275 | 0.221 | 0.332133492242 | gnomAD-4.0.0 | 1.54945E-05 | None | None | None | None | N | None | 2.6708E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52585E-05 | 0 | 8.00692E-05 |
E/Q | rs774950387 | None | 0.756 | N | 0.587 | 0.122 | 0.263140351381 | gnomAD-4.0.0 | 6.84304E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99556E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1485 | likely_benign | 0.1586 | benign | -1.035 | Destabilizing | 0.201 | N | 0.564 | neutral | N | 0.516396581 | None | None | N |
E/C | 0.6814 | likely_pathogenic | 0.73 | pathogenic | -0.665 | Destabilizing | 0.977 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/D | 0.205 | likely_benign | 0.2261 | benign | -1.444 | Destabilizing | 0.549 | D | 0.553 | neutral | N | 0.493797086 | None | None | N |
E/F | 0.4838 | ambiguous | 0.5167 | ambiguous | -0.547 | Destabilizing | 0.85 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/G | 0.2206 | likely_benign | 0.2518 | benign | -1.45 | Destabilizing | 0.549 | D | 0.646 | neutral | N | 0.502697856 | None | None | N |
E/H | 0.278 | likely_benign | 0.2992 | benign | -0.88 | Destabilizing | 0.012 | N | 0.376 | neutral | None | None | None | None | N |
E/I | 0.1691 | likely_benign | 0.1744 | benign | 0.124 | Stabilizing | 0.217 | N | 0.688 | prob.neutral | None | None | None | None | N |
E/K | 0.1244 | likely_benign | 0.1316 | benign | -1.061 | Destabilizing | 0.084 | N | 0.275 | neutral | N | 0.50721695 | None | None | N |
E/L | 0.2511 | likely_benign | 0.2641 | benign | 0.124 | Stabilizing | 0.447 | N | 0.648 | neutral | None | None | None | None | N |
E/M | 0.2815 | likely_benign | 0.2943 | benign | 0.706 | Stabilizing | 0.85 | D | 0.661 | neutral | None | None | None | None | N |
E/N | 0.2554 | likely_benign | 0.2871 | benign | -1.457 | Destabilizing | 0.617 | D | 0.598 | neutral | None | None | None | None | N |
E/P | 0.9598 | likely_pathogenic | 0.9657 | pathogenic | -0.242 | Destabilizing | 0.972 | D | 0.646 | neutral | None | None | None | None | N |
E/Q | 0.1036 | likely_benign | 0.1092 | benign | -1.26 | Destabilizing | 0.756 | D | 0.587 | neutral | N | 0.494634442 | None | None | N |
E/R | 0.19 | likely_benign | 0.1943 | benign | -0.859 | Destabilizing | 0.005 | N | 0.376 | neutral | None | None | None | None | N |
E/S | 0.1908 | likely_benign | 0.2033 | benign | -1.943 | Destabilizing | 0.617 | D | 0.572 | neutral | None | None | None | None | N |
E/T | 0.1698 | likely_benign | 0.1761 | benign | -1.582 | Destabilizing | 0.617 | D | 0.609 | neutral | None | None | None | None | N |
E/V | 0.1162 | likely_benign | 0.117 | benign | -0.242 | Destabilizing | 0.004 | N | 0.581 | neutral | N | 0.449363512 | None | None | N |
E/W | 0.7517 | likely_pathogenic | 0.7687 | pathogenic | -0.416 | Destabilizing | 0.992 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/Y | 0.422 | ambiguous | 0.4448 | ambiguous | -0.311 | Destabilizing | 0.85 | D | 0.674 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.