Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7316 | 22171;22172;22173 | chr2:178723061;178723060;178723059 | chr2:179587788;179587787;179587786 |
N2AB | 6999 | 21220;21221;21222 | chr2:178723061;178723060;178723059 | chr2:179587788;179587787;179587786 |
N2A | 6072 | 18439;18440;18441 | chr2:178723061;178723060;178723059 | chr2:179587788;179587787;179587786 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs745745237 | 0.191 | 0.272 | N | 0.562 | 0.164 | 0.505640481493 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
L/R | rs745745237 | 0.191 | 0.272 | N | 0.562 | 0.164 | 0.505640481493 | gnomAD-4.0.0 | 6.36799E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14379E-05 | 0 | 0 |
L/V | None | None | None | N | 0.18 | 0.128 | 0.229264304666 | gnomAD-4.0.0 | 6.84339E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99586E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0992 | likely_benign | 0.1124 | benign | -0.97 | Destabilizing | 0.002 | N | 0.257 | neutral | None | None | None | None | N |
L/C | 0.3684 | ambiguous | 0.3895 | ambiguous | -0.702 | Destabilizing | 0.859 | D | 0.515 | neutral | None | None | None | None | N |
L/D | 0.2883 | likely_benign | 0.3331 | benign | -0.334 | Destabilizing | 0.22 | N | 0.543 | neutral | None | None | None | None | N |
L/E | 0.1373 | likely_benign | 0.1601 | benign | -0.405 | Destabilizing | 0.124 | N | 0.507 | neutral | None | None | None | None | N |
L/F | 0.0844 | likely_benign | 0.0883 | benign | -0.835 | Destabilizing | 0.497 | N | 0.47 | neutral | None | None | None | None | N |
L/G | 0.3045 | likely_benign | 0.3443 | ambiguous | -1.189 | Destabilizing | 0.124 | N | 0.485 | neutral | None | None | None | None | N |
L/H | 0.1088 | likely_benign | 0.1151 | benign | -0.456 | Destabilizing | 0.789 | D | 0.513 | neutral | None | None | None | None | N |
L/I | 0.069 | likely_benign | 0.0718 | benign | -0.496 | Destabilizing | 0.02 | N | 0.394 | neutral | None | None | None | None | N |
L/K | 0.117 | likely_benign | 0.1211 | benign | -0.521 | Destabilizing | 0.124 | N | 0.5 | neutral | None | None | None | None | N |
L/M | 0.0925 | likely_benign | 0.0961 | benign | -0.416 | Destabilizing | 0.007 | N | 0.244 | neutral | N | 0.451817774 | None | None | N |
L/N | 0.1602 | likely_benign | 0.1787 | benign | -0.286 | Destabilizing | 0.22 | N | 0.56 | neutral | None | None | None | None | N |
L/P | 0.3412 | ambiguous | 0.4259 | ambiguous | -0.62 | Destabilizing | 0.602 | D | 0.566 | neutral | N | 0.470175518 | None | None | N |
L/Q | 0.0775 | likely_benign | 0.0835 | benign | -0.53 | Destabilizing | 0.007 | N | 0.314 | neutral | N | 0.412590983 | None | None | N |
L/R | 0.0926 | likely_benign | 0.0917 | benign | 0.055 | Stabilizing | 0.272 | N | 0.562 | neutral | N | 0.436755922 | None | None | N |
L/S | 0.1019 | likely_benign | 0.1175 | benign | -0.82 | Destabilizing | 0.011 | N | 0.337 | neutral | None | None | None | None | N |
L/T | 0.0908 | likely_benign | 0.0949 | benign | -0.78 | Destabilizing | 0.002 | N | 0.237 | neutral | None | None | None | None | N |
L/V | 0.0643 | likely_benign | 0.0659 | benign | -0.62 | Destabilizing | None | N | 0.18 | neutral | N | 0.471580571 | None | None | N |
L/W | 0.1525 | likely_benign | 0.1628 | benign | -0.835 | Destabilizing | 0.958 | D | 0.539 | neutral | None | None | None | None | N |
L/Y | 0.1956 | likely_benign | 0.2158 | benign | -0.589 | Destabilizing | 0.667 | D | 0.535 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.