Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC731622171;22172;22173 chr2:178723061;178723060;178723059chr2:179587788;179587787;179587786
N2AB699921220;21221;21222 chr2:178723061;178723060;178723059chr2:179587788;179587787;179587786
N2A607218439;18440;18441 chr2:178723061;178723060;178723059chr2:179587788;179587787;179587786
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTG
  • RefSeq wild type template codon: GAC
  • Domain: Ig-57
  • Domain position: 87
  • Structural Position: 173
  • Q(SASA): 0.3829
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/R rs745745237 0.191 0.272 N 0.562 0.164 0.505640481493 gnomAD-2.1.1 4.03E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.91E-06 0
L/R rs745745237 0.191 0.272 N 0.562 0.164 0.505640481493 gnomAD-4.0.0 6.36799E-06 None None None None N None 0 0 None 0 0 None 0 0 1.14379E-05 0 0
L/V None None None N 0.18 0.128 0.229264304666 gnomAD-4.0.0 6.84339E-07 None None None None N None 0 0 None 0 0 None 0 0 8.99586E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.0992 likely_benign 0.1124 benign -0.97 Destabilizing 0.002 N 0.257 neutral None None None None N
L/C 0.3684 ambiguous 0.3895 ambiguous -0.702 Destabilizing 0.859 D 0.515 neutral None None None None N
L/D 0.2883 likely_benign 0.3331 benign -0.334 Destabilizing 0.22 N 0.543 neutral None None None None N
L/E 0.1373 likely_benign 0.1601 benign -0.405 Destabilizing 0.124 N 0.507 neutral None None None None N
L/F 0.0844 likely_benign 0.0883 benign -0.835 Destabilizing 0.497 N 0.47 neutral None None None None N
L/G 0.3045 likely_benign 0.3443 ambiguous -1.189 Destabilizing 0.124 N 0.485 neutral None None None None N
L/H 0.1088 likely_benign 0.1151 benign -0.456 Destabilizing 0.789 D 0.513 neutral None None None None N
L/I 0.069 likely_benign 0.0718 benign -0.496 Destabilizing 0.02 N 0.394 neutral None None None None N
L/K 0.117 likely_benign 0.1211 benign -0.521 Destabilizing 0.124 N 0.5 neutral None None None None N
L/M 0.0925 likely_benign 0.0961 benign -0.416 Destabilizing 0.007 N 0.244 neutral N 0.451817774 None None N
L/N 0.1602 likely_benign 0.1787 benign -0.286 Destabilizing 0.22 N 0.56 neutral None None None None N
L/P 0.3412 ambiguous 0.4259 ambiguous -0.62 Destabilizing 0.602 D 0.566 neutral N 0.470175518 None None N
L/Q 0.0775 likely_benign 0.0835 benign -0.53 Destabilizing 0.007 N 0.314 neutral N 0.412590983 None None N
L/R 0.0926 likely_benign 0.0917 benign 0.055 Stabilizing 0.272 N 0.562 neutral N 0.436755922 None None N
L/S 0.1019 likely_benign 0.1175 benign -0.82 Destabilizing 0.011 N 0.337 neutral None None None None N
L/T 0.0908 likely_benign 0.0949 benign -0.78 Destabilizing 0.002 N 0.237 neutral None None None None N
L/V 0.0643 likely_benign 0.0659 benign -0.62 Destabilizing None N 0.18 neutral N 0.471580571 None None N
L/W 0.1525 likely_benign 0.1628 benign -0.835 Destabilizing 0.958 D 0.539 neutral None None None None N
L/Y 0.1956 likely_benign 0.2158 benign -0.589 Destabilizing 0.667 D 0.535 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.