Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7325 | 22198;22199;22200 | chr2:178722926;178722925;178722924 | chr2:179587653;179587652;179587651 |
N2AB | 7008 | 21247;21248;21249 | chr2:178722926;178722925;178722924 | chr2:179587653;179587652;179587651 |
N2A | 6081 | 18466;18467;18468 | chr2:178722926;178722925;178722924 | chr2:179587653;179587652;179587651 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.998 | N | 0.647 | 0.713 | 0.523082183605 | gnomAD-4.0.0 | 1.60027E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.04062E-05 |
F/V | None | None | 0.999 | N | 0.737 | 0.712 | 0.8835682466 | gnomAD-4.0.0 | 6.8582E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00815E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9606 | likely_pathogenic | 0.9891 | pathogenic | -2.863 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
F/C | 0.9223 | likely_pathogenic | 0.977 | pathogenic | -1.761 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.558022395 | None | None | N |
F/D | 0.995 | likely_pathogenic | 0.9984 | pathogenic | -2.481 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
F/E | 0.9945 | likely_pathogenic | 0.9983 | pathogenic | -2.385 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
F/G | 0.9879 | likely_pathogenic | 0.9966 | pathogenic | -3.196 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
F/H | 0.9735 | likely_pathogenic | 0.9887 | pathogenic | -1.402 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
F/I | 0.548 | ambiguous | 0.745 | pathogenic | -1.819 | Destabilizing | 0.999 | D | 0.67 | neutral | D | 0.526557646 | None | None | N |
F/K | 0.9938 | likely_pathogenic | 0.9977 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
F/L | 0.9431 | likely_pathogenic | 0.9768 | pathogenic | -1.819 | Destabilizing | 0.998 | D | 0.647 | neutral | N | 0.505832316 | None | None | N |
F/M | 0.8636 | likely_pathogenic | 0.9354 | pathogenic | -1.604 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
F/N | 0.9855 | likely_pathogenic | 0.995 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
F/P | 0.9953 | likely_pathogenic | 0.9986 | pathogenic | -2.168 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
F/Q | 0.9911 | likely_pathogenic | 0.9971 | pathogenic | -1.838 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
F/R | 0.9817 | likely_pathogenic | 0.9927 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
F/S | 0.9601 | likely_pathogenic | 0.9905 | pathogenic | -2.377 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.557515416 | None | None | N |
F/T | 0.9608 | likely_pathogenic | 0.9885 | pathogenic | -2.19 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
F/V | 0.6356 | likely_pathogenic | 0.8112 | pathogenic | -2.168 | Highly Destabilizing | 0.999 | D | 0.737 | prob.delet. | N | 0.505894769 | None | None | N |
F/W | 0.8857 | likely_pathogenic | 0.9383 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
F/Y | 0.6341 | likely_pathogenic | 0.7526 | pathogenic | -0.954 | Destabilizing | 0.998 | D | 0.587 | neutral | D | 0.5464126 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.