Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7334 | 22225;22226;22227 | chr2:178722899;178722898;178722897 | chr2:179587626;179587625;179587624 |
N2AB | 7017 | 21274;21275;21276 | chr2:178722899;178722898;178722897 | chr2:179587626;179587625;179587624 |
N2A | 6090 | 18493;18494;18495 | chr2:178722899;178722898;178722897 | chr2:179587626;179587625;179587624 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.095 | N | 0.215 | 0.112 | 0.257292322809 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5384 | ambiguous | 0.6054 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.377 | neutral | None | None | None | None | I |
A/D | 0.4654 | ambiguous | 0.6289 | pathogenic | -1.681 | Destabilizing | 0.99 | D | 0.41 | neutral | None | None | None | None | I |
A/E | 0.4014 | ambiguous | 0.525 | ambiguous | -1.581 | Destabilizing | 0.999 | D | 0.409 | neutral | N | 0.501789711 | None | None | I |
A/F | 0.3897 | ambiguous | 0.5043 | ambiguous | -0.819 | Destabilizing | 0.999 | D | 0.395 | neutral | None | None | None | None | I |
A/G | 0.1436 | likely_benign | 0.1835 | benign | -1.373 | Destabilizing | 0.683 | D | 0.325 | neutral | N | 0.495775776 | None | None | I |
A/H | 0.6433 | likely_pathogenic | 0.7535 | pathogenic | -1.72 | Destabilizing | 1.0 | D | 0.387 | neutral | None | None | None | None | I |
A/I | 0.211 | likely_benign | 0.2952 | benign | 0.025 | Stabilizing | 0.993 | D | 0.361 | neutral | None | None | None | None | I |
A/K | 0.5429 | ambiguous | 0.6772 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.411 | neutral | None | None | None | None | I |
A/L | 0.2189 | likely_benign | 0.3036 | benign | 0.025 | Stabilizing | 0.983 | D | 0.33 | neutral | None | None | None | None | I |
A/M | 0.2164 | likely_benign | 0.2929 | benign | -0.033 | Destabilizing | 1.0 | D | 0.379 | neutral | None | None | None | None | I |
A/N | 0.4092 | ambiguous | 0.5616 | ambiguous | -1.219 | Destabilizing | 0.923 | D | 0.4 | neutral | None | None | None | None | I |
A/P | 0.6894 | likely_pathogenic | 0.8146 | pathogenic | -0.263 | Destabilizing | 0.994 | D | 0.397 | neutral | N | 0.516032852 | None | None | I |
A/Q | 0.522 | ambiguous | 0.6236 | pathogenic | -1.184 | Destabilizing | 0.999 | D | 0.383 | neutral | None | None | None | None | I |
A/R | 0.5263 | ambiguous | 0.6325 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.391 | neutral | None | None | None | None | I |
A/S | 0.1306 | likely_benign | 0.1589 | benign | -1.628 | Destabilizing | 0.06 | N | 0.269 | neutral | N | 0.512801702 | None | None | I |
A/T | 0.0936 | likely_benign | 0.1137 | benign | -1.409 | Destabilizing | 0.076 | N | 0.203 | neutral | D | 0.523690699 | None | None | I |
A/V | 0.095 | likely_benign | 0.1205 | benign | -0.263 | Destabilizing | 0.095 | N | 0.215 | neutral | N | 0.41896046 | None | None | I |
A/W | 0.8219 | likely_pathogenic | 0.8853 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.523 | neutral | None | None | None | None | I |
A/Y | 0.5429 | ambiguous | 0.6679 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.393 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.