Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7354 | 22285;22286;22287 | chr2:178722839;178722838;178722837 | chr2:179587566;179587565;179587564 |
N2AB | 7037 | 21334;21335;21336 | chr2:178722839;178722838;178722837 | chr2:179587566;179587565;179587564 |
N2A | 6110 | 18553;18554;18555 | chr2:178722839;178722838;178722837 | chr2:179587566;179587565;179587564 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1191619826 | None | 0.78 | D | 0.706 | 0.663 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs1191619826 | None | 0.78 | D | 0.706 | 0.663 | None | gnomAD-4.0.0 | 6.57531E-06 | None | None | None | None | I | None | 2.41394E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5779 | likely_pathogenic | 0.7401 | pathogenic | -1.629 | Destabilizing | 0.78 | D | 0.706 | prob.neutral | D | 0.575014259 | None | None | I |
V/C | 0.9243 | likely_pathogenic | 0.9553 | pathogenic | -1.106 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | I |
V/D | 0.9779 | likely_pathogenic | 0.9924 | pathogenic | -1.399 | Destabilizing | 0.988 | D | 0.859 | deleterious | None | None | None | None | I |
V/E | 0.9506 | likely_pathogenic | 0.979 | pathogenic | -1.301 | Destabilizing | 0.984 | D | 0.825 | deleterious | D | 0.613401789 | None | None | I |
V/F | 0.4607 | ambiguous | 0.6059 | pathogenic | -1.025 | Destabilizing | 0.976 | D | 0.795 | deleterious | None | None | None | None | I |
V/G | 0.8072 | likely_pathogenic | 0.9032 | pathogenic | -2.06 | Highly Destabilizing | 0.984 | D | 0.823 | deleterious | D | 0.613401789 | None | None | I |
V/H | 0.9788 | likely_pathogenic | 0.9905 | pathogenic | -1.643 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | I |
V/I | 0.0844 | likely_benign | 0.09 | benign | -0.497 | Destabilizing | 0.015 | N | 0.253 | neutral | None | None | None | None | I |
V/K | 0.9648 | likely_pathogenic | 0.9819 | pathogenic | -1.286 | Destabilizing | 0.988 | D | 0.833 | deleterious | None | None | None | None | I |
V/L | 0.4365 | ambiguous | 0.5408 | ambiguous | -0.497 | Destabilizing | 0.64 | D | 0.523 | neutral | D | 0.573770939 | None | None | I |
V/M | 0.379 | ambiguous | 0.4945 | ambiguous | -0.439 | Destabilizing | 0.968 | D | 0.701 | prob.neutral | D | 0.561921957 | None | None | I |
V/N | 0.939 | likely_pathogenic | 0.9746 | pathogenic | -1.225 | Destabilizing | 0.988 | D | 0.869 | deleterious | None | None | None | None | I |
V/P | 0.9463 | likely_pathogenic | 0.9705 | pathogenic | -0.841 | Destabilizing | 0.996 | D | 0.869 | deleterious | None | None | None | None | I |
V/Q | 0.9514 | likely_pathogenic | 0.9751 | pathogenic | -1.238 | Destabilizing | 0.996 | D | 0.862 | deleterious | None | None | None | None | I |
V/R | 0.9449 | likely_pathogenic | 0.9696 | pathogenic | -0.963 | Destabilizing | 0.988 | D | 0.864 | deleterious | None | None | None | None | I |
V/S | 0.8135 | likely_pathogenic | 0.9087 | pathogenic | -1.867 | Destabilizing | 0.851 | D | 0.828 | deleterious | None | None | None | None | I |
V/T | 0.682 | likely_pathogenic | 0.7859 | pathogenic | -1.635 | Destabilizing | 0.132 | N | 0.408 | neutral | None | None | None | None | I |
V/W | 0.9792 | likely_pathogenic | 0.9911 | pathogenic | -1.338 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | I |
V/Y | 0.9121 | likely_pathogenic | 0.9556 | pathogenic | -0.99 | Destabilizing | 0.996 | D | 0.781 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.