Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7360 | 22303;22304;22305 | chr2:178722821;178722820;178722819 | chr2:179587548;179587547;179587546 |
N2AB | 7043 | 21352;21353;21354 | chr2:178722821;178722820;178722819 | chr2:179587548;179587547;179587546 |
N2A | 6116 | 18571;18572;18573 | chr2:178722821;178722820;178722819 | chr2:179587548;179587547;179587546 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.999 | N | 0.563 | 0.487 | 0.541875726618 | gnomAD-4.0.0 | 1.36879E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1534 | likely_benign | 0.2443 | benign | -0.015 | Destabilizing | 0.989 | D | 0.425 | neutral | N | 0.49530558 | None | None | N |
D/C | 0.6037 | likely_pathogenic | 0.7841 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | N |
D/E | 0.1437 | likely_benign | 0.2053 | benign | -0.346 | Destabilizing | 0.989 | D | 0.45 | neutral | N | 0.465636034 | None | None | N |
D/F | 0.448 | ambiguous | 0.6397 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.543 | neutral | None | None | None | None | N |
D/G | 0.1268 | likely_benign | 0.1991 | benign | -0.113 | Destabilizing | 0.217 | N | 0.283 | neutral | N | 0.37335223 | None | None | N |
D/H | 0.2488 | likely_benign | 0.3817 | ambiguous | 0.492 | Stabilizing | 1.0 | D | 0.445 | neutral | N | 0.50642665 | None | None | N |
D/I | 0.2819 | likely_benign | 0.4613 | ambiguous | 0.178 | Stabilizing | 1.0 | D | 0.567 | neutral | None | None | None | None | N |
D/K | 0.3035 | likely_benign | 0.4553 | ambiguous | 0.445 | Stabilizing | 0.998 | D | 0.465 | neutral | None | None | None | None | N |
D/L | 0.3308 | likely_benign | 0.4868 | ambiguous | 0.178 | Stabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
D/M | 0.4979 | ambiguous | 0.6774 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | N |
D/N | 0.08 | likely_benign | 0.107 | benign | 0.177 | Stabilizing | 0.733 | D | 0.291 | neutral | N | 0.468521623 | None | None | N |
D/P | 0.5889 | likely_pathogenic | 0.7696 | pathogenic | 0.132 | Stabilizing | 1.0 | D | 0.458 | neutral | None | None | None | None | N |
D/Q | 0.2875 | likely_benign | 0.437 | ambiguous | 0.181 | Stabilizing | 0.999 | D | 0.446 | neutral | None | None | None | None | N |
D/R | 0.3436 | ambiguous | 0.4984 | ambiguous | 0.639 | Stabilizing | 0.999 | D | 0.471 | neutral | None | None | None | None | N |
D/S | 0.1157 | likely_benign | 0.1684 | benign | 0.103 | Stabilizing | 0.992 | D | 0.413 | neutral | None | None | None | None | N |
D/T | 0.2082 | likely_benign | 0.3369 | benign | 0.191 | Stabilizing | 0.998 | D | 0.457 | neutral | None | None | None | None | N |
D/V | 0.1882 | likely_benign | 0.3026 | benign | 0.132 | Stabilizing | 0.999 | D | 0.563 | neutral | N | 0.482002804 | None | None | N |
D/W | 0.8364 | likely_pathogenic | 0.925 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
D/Y | 0.1892 | likely_benign | 0.2877 | benign | 0.12 | Stabilizing | 1.0 | D | 0.543 | neutral | N | 0.470393009 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.