Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7377 | 22354;22355;22356 | chr2:178722770;178722769;178722768 | chr2:179587497;179587496;179587495 |
N2AB | 7060 | 21403;21404;21405 | chr2:178722770;178722769;178722768 | chr2:179587497;179587496;179587495 |
N2A | 6133 | 18622;18623;18624 | chr2:178722770;178722769;178722768 | chr2:179587497;179587496;179587495 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1490395674 | -0.646 | 0.06 | D | 0.435 | 0.142 | 0.37479162749 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/M | rs1490395674 | -0.646 | 0.06 | D | 0.435 | 0.142 | 0.37479162749 | gnomAD-4.0.0 | 4.77704E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57947E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2095 | likely_benign | 0.3286 | benign | -1.562 | Destabilizing | 0.123 | N | 0.449 | neutral | N | 0.512489484 | None | None | N |
V/C | 0.8247 | likely_pathogenic | 0.8751 | pathogenic | -1.199 | Destabilizing | 0.987 | D | 0.604 | neutral | None | None | None | None | N |
V/D | 0.4432 | ambiguous | 0.6149 | pathogenic | -2.192 | Highly Destabilizing | 0.94 | D | 0.742 | deleterious | None | None | None | None | N |
V/E | 0.2834 | likely_benign | 0.4058 | ambiguous | -2.196 | Highly Destabilizing | 0.658 | D | 0.681 | prob.neutral | N | 0.500944339 | None | None | N |
V/F | 0.1815 | likely_benign | 0.2373 | benign | -1.391 | Destabilizing | 0.854 | D | 0.631 | neutral | None | None | None | None | N |
V/G | 0.3746 | ambiguous | 0.5497 | ambiguous | -1.87 | Destabilizing | 0.888 | D | 0.702 | prob.neutral | N | 0.479513061 | None | None | N |
V/H | 0.5559 | ambiguous | 0.6746 | pathogenic | -1.509 | Destabilizing | 0.99 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/I | 0.067 | likely_benign | 0.0706 | benign | -0.805 | Destabilizing | 0.002 | N | 0.154 | neutral | None | None | None | None | N |
V/K | 0.2778 | likely_benign | 0.3984 | ambiguous | -1.273 | Destabilizing | 0.733 | D | 0.671 | neutral | None | None | None | None | N |
V/L | 0.2273 | likely_benign | 0.2937 | benign | -0.805 | Destabilizing | None | N | 0.141 | neutral | N | 0.504390076 | None | None | N |
V/M | 0.1214 | likely_benign | 0.1562 | benign | -0.586 | Destabilizing | 0.06 | N | 0.435 | neutral | D | 0.533635547 | None | None | N |
V/N | 0.3296 | likely_benign | 0.4523 | ambiguous | -1.183 | Destabilizing | 0.453 | N | 0.745 | deleterious | None | None | None | None | N |
V/P | 0.9729 | likely_pathogenic | 0.9885 | pathogenic | -1.025 | Destabilizing | 0.716 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/Q | 0.3115 | likely_benign | 0.4247 | ambiguous | -1.409 | Destabilizing | 0.661 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/R | 0.2614 | likely_benign | 0.3689 | ambiguous | -0.749 | Destabilizing | 0.854 | D | 0.742 | deleterious | None | None | None | None | N |
V/S | 0.275 | likely_benign | 0.4097 | ambiguous | -1.605 | Destabilizing | 0.76 | D | 0.639 | neutral | None | None | None | None | N |
V/T | 0.152 | likely_benign | 0.2064 | benign | -1.51 | Destabilizing | 0.267 | N | 0.492 | neutral | None | None | None | None | N |
V/W | 0.8067 | likely_pathogenic | 0.8855 | pathogenic | -1.65 | Destabilizing | 0.997 | D | 0.734 | prob.delet. | None | None | None | None | N |
V/Y | 0.5315 | ambiguous | 0.6291 | pathogenic | -1.326 | Destabilizing | 0.922 | D | 0.64 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.