Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7379 | 22360;22361;22362 | chr2:178722764;178722763;178722762 | chr2:179587491;179587490;179587489 |
N2AB | 7062 | 21409;21410;21411 | chr2:178722764;178722763;178722762 | chr2:179587491;179587490;179587489 |
N2A | 6135 | 18628;18629;18630 | chr2:178722764;178722763;178722762 | chr2:179587491;179587490;179587489 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.704 | N | 0.379 | 0.267 | 0.295974979623 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0927 | likely_benign | 0.1348 | benign | -1.259 | Destabilizing | 0.704 | D | 0.379 | neutral | N | 0.485385814 | None | None | N |
T/C | 0.4408 | ambiguous | 0.5594 | ambiguous | -0.733 | Destabilizing | 0.046 | N | 0.316 | neutral | None | None | None | None | N |
T/D | 0.608 | likely_pathogenic | 0.8209 | pathogenic | -1.615 | Destabilizing | 0.939 | D | 0.523 | neutral | None | None | None | None | N |
T/E | 0.399 | ambiguous | 0.621 | pathogenic | -1.384 | Destabilizing | 0.939 | D | 0.536 | neutral | None | None | None | None | N |
T/F | 0.2492 | likely_benign | 0.4181 | ambiguous | -0.871 | Destabilizing | 0.991 | D | 0.606 | neutral | None | None | None | None | N |
T/G | 0.3675 | ambiguous | 0.5369 | ambiguous | -1.673 | Destabilizing | 0.939 | D | 0.545 | neutral | None | None | None | None | N |
T/H | 0.2542 | likely_benign | 0.402 | ambiguous | -1.687 | Destabilizing | 0.999 | D | 0.61 | neutral | None | None | None | None | N |
T/I | 0.1784 | likely_benign | 0.3083 | benign | -0.155 | Destabilizing | 0.134 | N | 0.383 | neutral | N | 0.487234041 | None | None | N |
T/K | 0.219 | likely_benign | 0.4051 | ambiguous | -0.327 | Destabilizing | 0.92 | D | 0.519 | neutral | N | 0.487655328 | None | None | N |
T/L | 0.1203 | likely_benign | 0.1915 | benign | -0.155 | Destabilizing | 0.759 | D | 0.475 | neutral | None | None | None | None | N |
T/M | 0.103 | likely_benign | 0.1365 | benign | -0.283 | Destabilizing | 0.991 | D | 0.576 | neutral | None | None | None | None | N |
T/N | 0.1815 | likely_benign | 0.2981 | benign | -1.078 | Destabilizing | 0.982 | D | 0.527 | neutral | None | None | None | None | N |
T/P | 0.7556 | likely_pathogenic | 0.9018 | pathogenic | -0.495 | Destabilizing | 0.988 | D | 0.557 | neutral | N | 0.49863984 | None | None | N |
T/Q | 0.2424 | likely_benign | 0.3857 | ambiguous | -0.791 | Destabilizing | 0.991 | D | 0.566 | neutral | None | None | None | None | N |
T/R | 0.1632 | likely_benign | 0.3153 | benign | -0.635 | Destabilizing | 0.988 | D | 0.561 | neutral | N | 0.469955002 | None | None | N |
T/S | 0.1216 | likely_benign | 0.1749 | benign | -1.289 | Destabilizing | 0.31 | N | 0.243 | neutral | N | 0.411829418 | None | None | N |
T/V | 0.1345 | likely_benign | 0.1987 | benign | -0.495 | Destabilizing | 0.759 | D | 0.463 | neutral | None | None | None | None | N |
T/W | 0.6106 | likely_pathogenic | 0.7769 | pathogenic | -1.073 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
T/Y | 0.2814 | likely_benign | 0.4276 | ambiguous | -0.667 | Destabilizing | 0.997 | D | 0.63 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.