Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7381 | 22366;22367;22368 | chr2:178722758;178722757;178722756 | chr2:179587485;179587484;179587483 |
N2AB | 7064 | 21415;21416;21417 | chr2:178722758;178722757;178722756 | chr2:179587485;179587484;179587483 |
N2A | 6137 | 18634;18635;18636 | chr2:178722758;178722757;178722756 | chr2:179587485;179587484;179587483 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs762179106 | -0.122 | 0.057 | N | 0.333 | 0.145 | 0.488196290542 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs762179106 | -0.122 | 0.057 | N | 0.333 | 0.145 | 0.488196290542 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs762179106 | -0.122 | 0.057 | N | 0.333 | 0.145 | 0.488196290542 | gnomAD-4.0.0 | 6.57549E-06 | None | None | None | None | N | None | 2.41383E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2022 | likely_benign | 0.4134 | ambiguous | -1.706 | Destabilizing | 0.006 | N | 0.213 | neutral | D | 0.534000907 | None | None | N |
V/C | 0.8002 | likely_pathogenic | 0.8993 | pathogenic | -1.35 | Destabilizing | 0.992 | D | 0.495 | neutral | None | None | None | None | N |
V/D | 0.4552 | ambiguous | 0.7736 | pathogenic | -1.785 | Destabilizing | 0.688 | D | 0.463 | neutral | D | 0.522034474 | None | None | N |
V/E | 0.3377 | likely_benign | 0.6086 | pathogenic | -1.606 | Destabilizing | 0.013 | N | 0.349 | neutral | None | None | None | None | N |
V/F | 0.174 | likely_benign | 0.3235 | benign | -1.009 | Destabilizing | 0.966 | D | 0.555 | neutral | N | 0.502928638 | None | None | N |
V/G | 0.2838 | likely_benign | 0.5536 | ambiguous | -2.2 | Highly Destabilizing | 0.749 | D | 0.446 | neutral | N | 0.490594308 | None | None | N |
V/H | 0.4966 | ambiguous | 0.7526 | pathogenic | -1.913 | Destabilizing | 0.994 | D | 0.537 | neutral | None | None | None | None | N |
V/I | 0.081 | likely_benign | 0.0945 | benign | -0.359 | Destabilizing | 0.002 | N | 0.196 | neutral | N | 0.463004813 | None | None | N |
V/K | 0.4032 | ambiguous | 0.676 | pathogenic | -1.178 | Destabilizing | 0.027 | N | 0.35 | neutral | None | None | None | None | N |
V/L | 0.1848 | likely_benign | 0.3349 | benign | -0.359 | Destabilizing | 0.057 | N | 0.333 | neutral | N | 0.475376678 | None | None | N |
V/M | 0.1734 | likely_benign | 0.3038 | benign | -0.532 | Destabilizing | 0.964 | D | 0.456 | neutral | None | None | None | None | N |
V/N | 0.3044 | likely_benign | 0.5829 | pathogenic | -1.367 | Destabilizing | 0.426 | N | 0.541 | neutral | None | None | None | None | N |
V/P | 0.9298 | likely_pathogenic | 0.9799 | pathogenic | -0.778 | Destabilizing | 0.601 | D | 0.521 | neutral | None | None | None | None | N |
V/Q | 0.3217 | likely_benign | 0.5482 | ambiguous | -1.258 | Destabilizing | 0.78 | D | 0.518 | neutral | None | None | None | None | N |
V/R | 0.3241 | likely_benign | 0.5647 | pathogenic | -1.071 | Destabilizing | 0.842 | D | 0.517 | neutral | None | None | None | None | N |
V/S | 0.2055 | likely_benign | 0.4311 | ambiguous | -2.047 | Highly Destabilizing | 0.543 | D | 0.408 | neutral | None | None | None | None | N |
V/T | 0.202 | likely_benign | 0.3956 | ambiguous | -1.725 | Destabilizing | 0.013 | N | 0.179 | neutral | None | None | None | None | N |
V/W | 0.8248 | likely_pathogenic | 0.9408 | pathogenic | -1.426 | Destabilizing | 1.0 | D | 0.559 | neutral | None | None | None | None | N |
V/Y | 0.5172 | ambiguous | 0.7135 | pathogenic | -1.025 | Destabilizing | 0.996 | D | 0.545 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.