Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7385 | 22378;22379;22380 | chr2:178722746;178722745;178722744 | chr2:179587473;179587472;179587471 |
N2AB | 7068 | 21427;21428;21429 | chr2:178722746;178722745;178722744 | chr2:179587473;179587472;179587471 |
N2A | 6141 | 18646;18647;18648 | chr2:178722746;178722745;178722744 | chr2:179587473;179587472;179587471 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1273152724 | -0.783 | 0.944 | N | 0.493 | 0.317 | 0.540153309661 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/L | rs1273152724 | -0.783 | 0.944 | N | 0.493 | 0.317 | 0.540153309661 | gnomAD-4.0.0 | 1.59266E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2307 | likely_benign | 0.3695 | ambiguous | -2.173 | Highly Destabilizing | 0.734 | D | 0.296 | neutral | N | 0.450174376 | None | None | N |
V/C | 0.8925 | likely_pathogenic | 0.9282 | pathogenic | -2.158 | Highly Destabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | N |
V/D | 0.9163 | likely_pathogenic | 0.9706 | pathogenic | -2.773 | Highly Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
V/E | 0.8835 | likely_pathogenic | 0.9502 | pathogenic | -2.534 | Highly Destabilizing | 1.0 | D | 0.609 | neutral | D | 0.530572843 | None | None | N |
V/F | 0.6485 | likely_pathogenic | 0.8248 | pathogenic | -1.383 | Destabilizing | 0.904 | D | 0.403 | neutral | None | None | None | None | N |
V/G | 0.3838 | ambiguous | 0.5738 | pathogenic | -2.728 | Highly Destabilizing | 0.999 | D | 0.639 | neutral | D | 0.523824894 | None | None | N |
V/H | 0.9711 | likely_pathogenic | 0.9901 | pathogenic | -2.503 | Highly Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
V/I | 0.1138 | likely_benign | 0.1362 | benign | -0.606 | Destabilizing | 0.739 | D | 0.507 | neutral | None | None | None | None | N |
V/K | 0.9316 | likely_pathogenic | 0.9737 | pathogenic | -1.707 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
V/L | 0.4196 | ambiguous | 0.5623 | ambiguous | -0.606 | Destabilizing | 0.944 | D | 0.493 | neutral | N | 0.48255894 | None | None | N |
V/M | 0.344 | ambiguous | 0.485 | ambiguous | -0.93 | Destabilizing | 1.0 | D | 0.565 | neutral | N | 0.507188669 | None | None | N |
V/N | 0.792 | likely_pathogenic | 0.8889 | pathogenic | -2.14 | Highly Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
V/P | 0.7808 | likely_pathogenic | 0.8791 | pathogenic | -1.103 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
V/Q | 0.897 | likely_pathogenic | 0.9566 | pathogenic | -1.941 | Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
V/R | 0.9141 | likely_pathogenic | 0.9649 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
V/S | 0.5099 | ambiguous | 0.6766 | pathogenic | -2.807 | Highly Destabilizing | 0.993 | D | 0.599 | neutral | None | None | None | None | N |
V/T | 0.3713 | ambiguous | 0.5056 | ambiguous | -2.409 | Highly Destabilizing | 0.991 | D | 0.557 | neutral | None | None | None | None | N |
V/W | 0.9858 | likely_pathogenic | 0.9953 | pathogenic | -1.854 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
V/Y | 0.9443 | likely_pathogenic | 0.9796 | pathogenic | -1.498 | Destabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.