Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7394 | 22405;22406;22407 | chr2:178722719;178722718;178722717 | chr2:179587446;179587445;179587444 |
N2AB | 7077 | 21454;21455;21456 | chr2:178722719;178722718;178722717 | chr2:179587446;179587445;179587444 |
N2A | 6150 | 18673;18674;18675 | chr2:178722719;178722718;178722717 | chr2:179587446;179587445;179587444 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.45 | N | 0.585 | 0.231 | 0.352262096564 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0775 | likely_benign | 0.0876 | benign | -1.74 | Destabilizing | None | N | 0.291 | neutral | N | 0.464774376 | None | None | N |
T/C | 0.2997 | likely_benign | 0.3568 | ambiguous | -1.04 | Destabilizing | 0.92 | D | 0.617 | neutral | None | None | None | None | N |
T/D | 0.3504 | ambiguous | 0.4708 | ambiguous | -1.692 | Destabilizing | 0.189 | N | 0.574 | neutral | None | None | None | None | N |
T/E | 0.2492 | likely_benign | 0.3377 | benign | -1.441 | Destabilizing | 0.02 | N | 0.425 | neutral | None | None | None | None | N |
T/F | 0.1386 | likely_benign | 0.169 | benign | -1.357 | Destabilizing | 0.953 | D | 0.623 | neutral | None | None | None | None | N |
T/G | 0.2304 | likely_benign | 0.2948 | benign | -2.131 | Highly Destabilizing | 0.005 | N | 0.461 | neutral | None | None | None | None | N |
T/H | 0.1905 | likely_benign | 0.2323 | benign | -1.855 | Destabilizing | 0.939 | D | 0.621 | neutral | None | None | None | None | N |
T/I | 0.0736 | likely_benign | 0.0911 | benign | -0.676 | Destabilizing | 0.002 | N | 0.385 | neutral | N | 0.487880962 | None | None | N |
T/K | 0.2114 | likely_benign | 0.2842 | benign | -0.283 | Destabilizing | 0.45 | N | 0.585 | neutral | N | 0.503330417 | None | None | N |
T/L | 0.0719 | likely_benign | 0.0867 | benign | -0.676 | Destabilizing | 0.309 | N | 0.515 | neutral | None | None | None | None | N |
T/M | 0.0787 | likely_benign | 0.0867 | benign | -0.825 | Destabilizing | 0.884 | D | 0.622 | neutral | None | None | None | None | N |
T/N | 0.1196 | likely_benign | 0.1473 | benign | -1.018 | Destabilizing | 0.189 | N | 0.549 | neutral | None | None | None | None | N |
T/P | 0.6104 | likely_pathogenic | 0.7672 | pathogenic | -1.008 | Destabilizing | 0.416 | N | 0.635 | neutral | N | 0.506858689 | None | None | N |
T/Q | 0.2032 | likely_benign | 0.2609 | benign | -0.769 | Destabilizing | 0.78 | D | 0.631 | neutral | None | None | None | None | N |
T/R | 0.1409 | likely_benign | 0.1921 | benign | -0.538 | Destabilizing | 0.939 | D | 0.631 | neutral | N | 0.492574706 | None | None | N |
T/S | 0.0932 | likely_benign | 0.1026 | benign | -1.338 | Destabilizing | 0.002 | N | 0.295 | neutral | N | 0.442743318 | None | None | N |
T/V | 0.0852 | likely_benign | 0.0972 | benign | -1.008 | Destabilizing | 0.02 | N | 0.292 | neutral | None | None | None | None | N |
T/W | 0.4155 | ambiguous | 0.5117 | ambiguous | -1.391 | Destabilizing | 0.998 | D | 0.658 | neutral | None | None | None | None | N |
T/Y | 0.179 | likely_benign | 0.2206 | benign | -1.069 | Destabilizing | 0.992 | D | 0.614 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.