Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7446 | 22561;22562;22563 | chr2:178722451;178722450;178722449 | chr2:179587178;179587177;179587176 |
N2AB | 7129 | 21610;21611;21612 | chr2:178722451;178722450;178722449 | chr2:179587178;179587177;179587176 |
N2A | 6202 | 18829;18830;18831 | chr2:178722451;178722450;178722449 | chr2:179587178;179587177;179587176 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.012 | N | 0.385 | 0.151 | 0.218112801441 | gnomAD-4.0.0 | 1.59196E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0259E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6146 | likely_pathogenic | 0.604 | pathogenic | -0.901 | Destabilizing | 0.676 | D | 0.457 | neutral | None | None | None | None | I |
A/D | 0.1501 | likely_benign | 0.1731 | benign | -0.566 | Destabilizing | 0.016 | N | 0.367 | neutral | None | None | None | None | I |
A/E | 0.112 | likely_benign | 0.1301 | benign | -0.708 | Destabilizing | None | N | 0.087 | neutral | N | 0.414008506 | None | None | I |
A/F | 0.2534 | likely_benign | 0.2677 | benign | -0.91 | Destabilizing | 0.356 | N | 0.462 | neutral | None | None | None | None | I |
A/G | 0.1313 | likely_benign | 0.1396 | benign | -0.301 | Destabilizing | 0.012 | N | 0.379 | neutral | N | 0.480790858 | None | None | I |
A/H | 0.3451 | ambiguous | 0.3667 | ambiguous | -0.233 | Destabilizing | 0.356 | N | 0.473 | neutral | None | None | None | None | I |
A/I | 0.1773 | likely_benign | 0.1955 | benign | -0.426 | Destabilizing | 0.214 | N | 0.547 | neutral | None | None | None | None | I |
A/K | 0.2587 | likely_benign | 0.2908 | benign | -0.653 | Destabilizing | 0.016 | N | 0.427 | neutral | None | None | None | None | I |
A/L | 0.1282 | likely_benign | 0.1341 | benign | -0.426 | Destabilizing | 0.072 | N | 0.421 | neutral | None | None | None | None | I |
A/M | 0.1724 | likely_benign | 0.1857 | benign | -0.647 | Destabilizing | 0.628 | D | 0.473 | neutral | None | None | None | None | I |
A/N | 0.1877 | likely_benign | 0.207 | benign | -0.368 | Destabilizing | 0.038 | N | 0.495 | neutral | None | None | None | None | I |
A/P | 0.125 | likely_benign | 0.15 | benign | -0.352 | Destabilizing | None | N | 0.161 | neutral | N | 0.336533865 | None | None | I |
A/Q | 0.2038 | likely_benign | 0.2265 | benign | -0.618 | Destabilizing | 0.001 | N | 0.118 | neutral | None | None | None | None | I |
A/R | 0.2708 | likely_benign | 0.2949 | benign | -0.206 | Destabilizing | 0.072 | N | 0.495 | neutral | None | None | None | None | I |
A/S | 0.0753 | likely_benign | 0.0781 | benign | -0.556 | Destabilizing | None | N | 0.059 | neutral | N | 0.431151472 | None | None | I |
A/T | 0.0733 | likely_benign | 0.0788 | benign | -0.624 | Destabilizing | 0.012 | N | 0.385 | neutral | N | 0.492007929 | None | None | I |
A/V | 0.0943 | likely_benign | 0.0997 | benign | -0.352 | Destabilizing | 0.055 | N | 0.353 | neutral | N | 0.496856389 | None | None | I |
A/W | 0.6493 | likely_pathogenic | 0.669 | pathogenic | -1.014 | Destabilizing | 0.864 | D | 0.491 | neutral | None | None | None | None | I |
A/Y | 0.3666 | ambiguous | 0.3847 | ambiguous | -0.704 | Destabilizing | 0.356 | N | 0.467 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.