Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7448 | 22567;22568;22569 | chr2:178722445;178722444;178722443 | chr2:179587172;179587171;179587170 |
N2AB | 7131 | 21616;21617;21618 | chr2:178722445;178722444;178722443 | chr2:179587172;179587171;179587170 |
N2A | 6204 | 18835;18836;18837 | chr2:178722445;178722444;178722443 | chr2:179587172;179587171;179587170 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs878854293 | None | 0.98 | N | 0.635 | 0.375 | 0.756846489486 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
I/V | rs1349950887 | None | 0.689 | N | 0.425 | 0.143 | 0.52851136469 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1349950887 | None | 0.689 | N | 0.425 | 0.143 | 0.52851136469 | gnomAD-4.0.0 | 2.56325E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78863E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7562 | likely_pathogenic | 0.7745 | pathogenic | -2.243 | Highly Destabilizing | 0.97 | D | 0.55 | neutral | None | None | None | None | I |
I/C | 0.9335 | likely_pathogenic | 0.9363 | pathogenic | -1.455 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
I/D | 0.9822 | likely_pathogenic | 0.9842 | pathogenic | -1.679 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | I |
I/E | 0.9591 | likely_pathogenic | 0.9593 | pathogenic | -1.571 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
I/F | 0.3088 | likely_benign | 0.3493 | ambiguous | -1.426 | Destabilizing | 0.071 | N | 0.349 | neutral | N | 0.49353037 | None | None | I |
I/G | 0.9434 | likely_pathogenic | 0.9499 | pathogenic | -2.694 | Highly Destabilizing | 0.996 | D | 0.695 | prob.neutral | None | None | None | None | I |
I/H | 0.9288 | likely_pathogenic | 0.9314 | pathogenic | -1.911 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
I/K | 0.902 | likely_pathogenic | 0.9022 | pathogenic | -1.577 | Destabilizing | 0.996 | D | 0.698 | prob.neutral | None | None | None | None | I |
I/L | 0.1011 | likely_benign | 0.1105 | benign | -1.006 | Destabilizing | 0.689 | D | 0.34 | neutral | N | 0.459847078 | None | None | I |
I/M | 0.1481 | likely_benign | 0.1721 | benign | -0.826 | Destabilizing | 0.489 | N | 0.315 | neutral | N | 0.506430303 | None | None | I |
I/N | 0.8419 | likely_pathogenic | 0.8527 | pathogenic | -1.517 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | N | 0.520535395 | None | None | I |
I/P | 0.8762 | likely_pathogenic | 0.8728 | pathogenic | -1.392 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | I |
I/Q | 0.8912 | likely_pathogenic | 0.8978 | pathogenic | -1.556 | Destabilizing | 0.996 | D | 0.729 | prob.delet. | None | None | None | None | I |
I/R | 0.8624 | likely_pathogenic | 0.8585 | pathogenic | -1.11 | Destabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | I |
I/S | 0.7922 | likely_pathogenic | 0.8045 | pathogenic | -2.265 | Highly Destabilizing | 0.994 | D | 0.649 | neutral | N | 0.518551452 | None | None | I |
I/T | 0.7661 | likely_pathogenic | 0.7842 | pathogenic | -2.017 | Highly Destabilizing | 0.98 | D | 0.635 | neutral | N | 0.488099093 | None | None | I |
I/V | 0.1131 | likely_benign | 0.1196 | benign | -1.392 | Destabilizing | 0.689 | D | 0.425 | neutral | N | 0.49173021 | None | None | I |
I/W | 0.9353 | likely_pathogenic | 0.9424 | pathogenic | -1.58 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
I/Y | 0.8181 | likely_pathogenic | 0.8361 | pathogenic | -1.359 | Destabilizing | 0.983 | D | 0.663 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.