Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7449 | 22570;22571;22572 | chr2:178722442;178722441;178722440 | chr2:179587169;179587168;179587167 |
N2AB | 7132 | 21619;21620;21621 | chr2:178722442;178722441;178722440 | chr2:179587169;179587168;179587167 |
N2A | 6205 | 18838;18839;18840 | chr2:178722442;178722441;178722440 | chr2:179587169;179587168;179587167 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | rs1269849836 | 0.476 | 0.103 | N | 0.289 | 0.289 | 0.506432333661 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/L | rs1269849836 | 0.476 | 0.103 | N | 0.289 | 0.289 | 0.506432333661 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | I | None | 0 | 2.28718E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.169 | likely_benign | 0.175 | benign | -0.137 | Destabilizing | 0.067 | N | 0.23 | neutral | None | None | None | None | I |
Q/C | 0.5824 | likely_pathogenic | 0.6244 | pathogenic | 0.104 | Stabilizing | 0.924 | D | 0.403 | neutral | None | None | None | None | I |
Q/D | 0.1815 | likely_benign | 0.2044 | benign | -0.013 | Destabilizing | 0.048 | N | 0.171 | neutral | None | None | None | None | I |
Q/E | 0.06 | likely_benign | 0.0619 | benign | -0.04 | Destabilizing | None | N | 0.077 | neutral | N | 0.414288146 | None | None | I |
Q/F | 0.5533 | ambiguous | 0.5614 | ambiguous | -0.359 | Destabilizing | 0.88 | D | 0.515 | neutral | None | None | None | None | I |
Q/G | 0.2297 | likely_benign | 0.2412 | benign | -0.318 | Destabilizing | 0.143 | N | 0.266 | neutral | None | None | None | None | I |
Q/H | 0.1126 | likely_benign | 0.1294 | benign | -0.165 | Destabilizing | 0.002 | N | 0.145 | neutral | N | 0.503968788 | None | None | I |
Q/I | 0.327 | likely_benign | 0.3429 | ambiguous | 0.248 | Stabilizing | 0.425 | N | 0.503 | neutral | None | None | None | None | I |
Q/K | 0.0822 | likely_benign | 0.0859 | benign | 0.057 | Stabilizing | 0.048 | N | 0.188 | neutral | N | 0.479262345 | None | None | I |
Q/L | 0.1293 | likely_benign | 0.1307 | benign | 0.248 | Stabilizing | 0.103 | N | 0.289 | neutral | N | 0.481708004 | None | None | I |
Q/M | 0.3341 | likely_benign | 0.3469 | ambiguous | 0.358 | Stabilizing | 0.941 | D | 0.389 | neutral | None | None | None | None | I |
Q/N | 0.1598 | likely_benign | 0.1784 | benign | -0.268 | Destabilizing | 0.003 | N | 0.101 | neutral | None | None | None | None | I |
Q/P | 0.2802 | likely_benign | 0.3191 | benign | 0.148 | Stabilizing | 0.46 | N | 0.393 | neutral | N | 0.492013114 | None | None | I |
Q/R | 0.0845 | likely_benign | 0.089 | benign | 0.224 | Stabilizing | 0.131 | N | 0.303 | neutral | N | 0.485054953 | None | None | I |
Q/S | 0.147 | likely_benign | 0.1555 | benign | -0.248 | Destabilizing | 0.01 | N | 0.099 | neutral | None | None | None | None | I |
Q/T | 0.1262 | likely_benign | 0.1361 | benign | -0.125 | Destabilizing | None | N | 0.168 | neutral | None | None | None | None | I |
Q/V | 0.2109 | likely_benign | 0.2158 | benign | 0.148 | Stabilizing | 0.044 | N | 0.313 | neutral | None | None | None | None | I |
Q/W | 0.4145 | ambiguous | 0.4317 | ambiguous | -0.366 | Destabilizing | 0.996 | D | 0.406 | neutral | None | None | None | None | I |
Q/Y | 0.3114 | likely_benign | 0.3325 | benign | -0.097 | Destabilizing | 0.341 | N | 0.489 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.