Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7450 | 22573;22574;22575 | chr2:178722439;178722438;178722437 | chr2:179587166;179587165;179587164 |
N2AB | 7133 | 21622;21623;21624 | chr2:178722439;178722438;178722437 | chr2:179587166;179587165;179587164 |
N2A | 6206 | 18841;18842;18843 | chr2:178722439;178722438;178722437 | chr2:179587166;179587165;179587164 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.621 | 0.641 | 0.782002166855 | gnomAD-4.0.0 | 2.05301E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69889E-06 | 0 | 0 |
V/L | rs1195511070 | -0.468 | 0.922 | D | 0.541 | 0.491 | 0.670247443365 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
V/L | rs1195511070 | -0.468 | 0.922 | D | 0.541 | 0.491 | 0.670247443365 | gnomAD-4.0.0 | 3.1839E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86607E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4479 | ambiguous | 0.4247 | ambiguous | -1.435 | Destabilizing | 0.999 | D | 0.621 | neutral | D | 0.563173862 | None | None | I |
V/C | 0.9296 | likely_pathogenic | 0.9217 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
V/D | 0.9387 | likely_pathogenic | 0.93 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
V/E | 0.8908 | likely_pathogenic | 0.8734 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.634760937 | None | None | I |
V/F | 0.4263 | ambiguous | 0.409 | ambiguous | -1.023 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
V/G | 0.6284 | likely_pathogenic | 0.6024 | pathogenic | -1.798 | Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.634760937 | None | None | I |
V/H | 0.9578 | likely_pathogenic | 0.9482 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
V/I | 0.0851 | likely_benign | 0.0909 | benign | -0.524 | Destabilizing | 0.503 | D | 0.202 | neutral | None | None | None | None | I |
V/K | 0.934 | likely_pathogenic | 0.9197 | pathogenic | -1.09 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
V/L | 0.367 | ambiguous | 0.3897 | ambiguous | -0.524 | Destabilizing | 0.922 | D | 0.541 | neutral | D | 0.554826653 | None | None | I |
V/M | 0.3643 | ambiguous | 0.3529 | ambiguous | -0.475 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | D | 0.602086442 | None | None | I |
V/N | 0.8456 | likely_pathogenic | 0.8293 | pathogenic | -0.914 | Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | I |
V/P | 0.8434 | likely_pathogenic | 0.8654 | pathogenic | -0.793 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | I |
V/Q | 0.9065 | likely_pathogenic | 0.889 | pathogenic | -0.997 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
V/R | 0.9007 | likely_pathogenic | 0.8831 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
V/S | 0.683 | likely_pathogenic | 0.6546 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
V/T | 0.4622 | ambiguous | 0.4308 | ambiguous | -1.314 | Destabilizing | 0.997 | D | 0.712 | prob.delet. | None | None | None | None | I |
V/W | 0.9688 | likely_pathogenic | 0.9656 | pathogenic | -1.236 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
V/Y | 0.8775 | likely_pathogenic | 0.8585 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.