Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7461 | 22606;22607;22608 | chr2:178722406;178722405;178722404 | chr2:179587133;179587132;179587131 |
N2AB | 7144 | 21655;21656;21657 | chr2:178722406;178722405;178722404 | chr2:179587133;179587132;179587131 |
N2A | 6217 | 18874;18875;18876 | chr2:178722406;178722405;178722404 | chr2:179587133;179587132;179587131 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs376383610 | None | 0.551 | N | 0.331 | 0.043 | 0.223847106136 | gnomAD-4.0.0 | 1.36872E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.04159E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3173 | likely_benign | 0.3108 | benign | -0.271 | Destabilizing | 0.811 | D | 0.332 | neutral | N | 0.443533618 | None | None | N |
D/C | 0.8689 | likely_pathogenic | 0.8563 | pathogenic | 0.114 | Stabilizing | 0.998 | D | 0.275 | neutral | None | None | None | None | N |
D/E | 0.2517 | likely_benign | 0.2533 | benign | -0.339 | Destabilizing | 0.551 | D | 0.331 | neutral | N | 0.462444666 | None | None | N |
D/F | 0.8386 | likely_pathogenic | 0.8178 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.279 | neutral | None | None | None | None | N |
D/G | 0.2308 | likely_benign | 0.2265 | benign | -0.479 | Destabilizing | 0.019 | N | 0.167 | neutral | N | 0.499522974 | None | None | N |
D/H | 0.5403 | ambiguous | 0.5123 | ambiguous | -0.2 | Destabilizing | 0.995 | D | 0.267 | neutral | N | 0.521418398 | None | None | N |
D/I | 0.7079 | likely_pathogenic | 0.6949 | pathogenic | 0.228 | Stabilizing | 0.999 | D | 0.302 | neutral | None | None | None | None | N |
D/K | 0.5761 | likely_pathogenic | 0.5666 | pathogenic | 0.31 | Stabilizing | 0.98 | D | 0.321 | neutral | None | None | None | None | N |
D/L | 0.6854 | likely_pathogenic | 0.6687 | pathogenic | 0.228 | Stabilizing | 0.99 | D | 0.356 | neutral | None | None | None | None | N |
D/M | 0.8373 | likely_pathogenic | 0.8291 | pathogenic | 0.428 | Stabilizing | 1.0 | D | 0.269 | neutral | None | None | None | None | N |
D/N | 0.1456 | likely_benign | 0.1538 | benign | 0.013 | Stabilizing | 0.903 | D | 0.256 | neutral | N | 0.49667467 | None | None | N |
D/P | 0.6463 | likely_pathogenic | 0.6745 | pathogenic | 0.085 | Stabilizing | 0.933 | D | 0.304 | neutral | None | None | None | None | N |
D/Q | 0.5453 | ambiguous | 0.5464 | ambiguous | 0.055 | Stabilizing | 0.769 | D | 0.18 | neutral | None | None | None | None | N |
D/R | 0.6054 | likely_pathogenic | 0.5935 | pathogenic | 0.417 | Stabilizing | 0.236 | N | 0.236 | neutral | None | None | None | None | N |
D/S | 0.2115 | likely_benign | 0.2249 | benign | -0.088 | Destabilizing | 0.518 | D | 0.193 | neutral | None | None | None | None | N |
D/T | 0.4428 | ambiguous | 0.442 | ambiguous | 0.074 | Stabilizing | 0.86 | D | 0.322 | neutral | None | None | None | None | N |
D/V | 0.4935 | ambiguous | 0.4696 | ambiguous | 0.085 | Stabilizing | 0.989 | D | 0.34 | neutral | N | 0.510662687 | None | None | N |
D/W | 0.942 | likely_pathogenic | 0.9294 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.304 | neutral | None | None | None | None | N |
D/Y | 0.4596 | ambiguous | 0.4214 | ambiguous | -0.019 | Destabilizing | 0.999 | D | 0.281 | neutral | N | 0.488441488 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.