Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7466 | 22621;22622;22623 | chr2:178722391;178722390;178722389 | chr2:179587118;179587117;179587116 |
N2AB | 7149 | 21670;21671;21672 | chr2:178722391;178722390;178722389 | chr2:179587118;179587117;179587116 |
N2A | 6222 | 18889;18890;18891 | chr2:178722391;178722390;178722389 | chr2:179587118;179587117;179587116 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1378606339 | None | 0.01 | N | 0.19 | 0.184 | 0.263612267334 | gnomAD-4.0.0 | 1.59206E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.4041 | ambiguous | 0.4346 | ambiguous | -0.669 | Destabilizing | 0.482 | N | 0.259 | neutral | None | None | None | None | I |
Q/C | 0.7845 | likely_pathogenic | 0.8165 | pathogenic | -0.315 | Destabilizing | 0.985 | D | 0.432 | neutral | None | None | None | None | I |
Q/D | 0.5928 | likely_pathogenic | 0.6431 | pathogenic | -1.468 | Destabilizing | 0.561 | D | 0.211 | neutral | None | None | None | None | I |
Q/E | 0.1021 | likely_benign | 0.1121 | benign | -1.324 | Destabilizing | 0.572 | D | 0.243 | neutral | N | 0.497117387 | None | None | I |
Q/F | 0.7658 | likely_pathogenic | 0.8093 | pathogenic | -0.436 | Destabilizing | 0.852 | D | 0.528 | neutral | None | None | None | None | I |
Q/G | 0.4997 | ambiguous | 0.5342 | ambiguous | -1.05 | Destabilizing | 0.81 | D | 0.361 | neutral | None | None | None | None | I |
Q/H | 0.2446 | likely_benign | 0.3049 | benign | -1.034 | Destabilizing | 0.01 | N | 0.19 | neutral | N | 0.499485688 | None | None | I |
Q/I | 0.4703 | ambiguous | 0.5254 | ambiguous | 0.32 | Stabilizing | 0.459 | N | 0.44 | neutral | None | None | None | None | I |
Q/K | 0.1176 | likely_benign | 0.1444 | benign | -0.46 | Destabilizing | 0.561 | D | 0.269 | neutral | N | 0.450382232 | None | None | I |
Q/L | 0.1984 | likely_benign | 0.2318 | benign | 0.32 | Stabilizing | 0.219 | N | 0.319 | neutral | N | 0.512164197 | None | None | I |
Q/M | 0.4948 | ambiguous | 0.5253 | ambiguous | 0.747 | Stabilizing | 0.138 | N | 0.188 | neutral | None | None | None | None | I |
Q/N | 0.484 | ambiguous | 0.531 | ambiguous | -1.199 | Destabilizing | 0.756 | D | 0.211 | neutral | None | None | None | None | I |
Q/P | 0.6795 | likely_pathogenic | 0.6949 | pathogenic | 0.021 | Stabilizing | 0.935 | D | 0.437 | neutral | N | 0.508800695 | None | None | I |
Q/R | 0.1204 | likely_benign | 0.1411 | benign | -0.471 | Destabilizing | 0.67 | D | 0.237 | neutral | N | 0.481321215 | None | None | I |
Q/S | 0.438 | ambiguous | 0.4728 | ambiguous | -1.253 | Destabilizing | 0.145 | N | 0.107 | neutral | None | None | None | None | I |
Q/T | 0.3325 | likely_benign | 0.37 | ambiguous | -0.918 | Destabilizing | 0.002 | N | 0.188 | neutral | None | None | None | None | I |
Q/V | 0.3347 | likely_benign | 0.3766 | ambiguous | 0.021 | Stabilizing | 0.007 | N | 0.263 | neutral | None | None | None | None | I |
Q/W | 0.6166 | likely_pathogenic | 0.6667 | pathogenic | -0.411 | Destabilizing | 0.046 | N | 0.319 | neutral | None | None | None | None | I |
Q/Y | 0.5459 | ambiguous | 0.6104 | pathogenic | -0.08 | Destabilizing | 0.852 | D | 0.421 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.