Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7473 | 22642;22643;22644 | chr2:178722370;178722369;178722368 | chr2:179587097;179587096;179587095 |
N2AB | 7156 | 21691;21692;21693 | chr2:178722370;178722369;178722368 | chr2:179587097;179587096;179587095 |
N2A | 6229 | 18910;18911;18912 | chr2:178722370;178722369;178722368 | chr2:179587097;179587096;179587095 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.792 | N | 0.545 | 0.244 | 0.52186301387 | gnomAD-4.0.0 | 6.84384E-07 | None | None | None | None | N | None | 2.99007E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs775242103 | -0.593 | 0.999 | N | 0.545 | 0.335 | None | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
V/M | rs775242103 | -0.593 | 0.999 | N | 0.545 | 0.335 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/M | rs775242103 | -0.593 | 0.999 | N | 0.545 | 0.335 | None | gnomAD-4.0.0 | 5.57877E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.62989E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1931 | likely_benign | 0.2027 | benign | -1.639 | Destabilizing | 0.925 | D | 0.451 | neutral | N | 0.485501746 | None | None | N |
V/C | 0.8715 | likely_pathogenic | 0.8656 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/D | 0.4369 | ambiguous | 0.4503 | ambiguous | -1.909 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
V/E | 0.2744 | likely_benign | 0.2794 | benign | -1.885 | Destabilizing | 0.959 | D | 0.727 | prob.delet. | D | 0.531651248 | None | None | N |
V/F | 0.2127 | likely_benign | 0.2083 | benign | -1.299 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/G | 0.3898 | ambiguous | 0.4017 | ambiguous | -1.978 | Destabilizing | 0.995 | D | 0.741 | deleterious | N | 0.505910228 | None | None | N |
V/H | 0.6132 | likely_pathogenic | 0.6328 | pathogenic | -1.544 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
V/I | 0.0751 | likely_benign | 0.0789 | benign | -0.791 | Destabilizing | 0.924 | D | 0.519 | neutral | None | None | None | None | N |
V/K | 0.4163 | ambiguous | 0.4431 | ambiguous | -1.289 | Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | N |
V/L | 0.2721 | likely_benign | 0.2903 | benign | -0.791 | Destabilizing | 0.792 | D | 0.545 | neutral | N | 0.520820966 | None | None | N |
V/M | 0.1329 | likely_benign | 0.1453 | benign | -0.697 | Destabilizing | 0.999 | D | 0.545 | neutral | N | 0.51147004 | None | None | N |
V/N | 0.3324 | likely_benign | 0.3711 | ambiguous | -1.197 | Destabilizing | 0.973 | D | 0.757 | deleterious | None | None | None | None | N |
V/P | 0.9791 | likely_pathogenic | 0.9771 | pathogenic | -1.041 | Destabilizing | 0.986 | D | 0.762 | deleterious | None | None | None | None | N |
V/Q | 0.3447 | ambiguous | 0.3704 | ambiguous | -1.374 | Destabilizing | 0.997 | D | 0.763 | deleterious | None | None | None | None | N |
V/R | 0.3748 | ambiguous | 0.3945 | ambiguous | -0.813 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
V/S | 0.2473 | likely_benign | 0.2615 | benign | -1.719 | Destabilizing | 0.754 | D | 0.435 | neutral | None | None | None | None | N |
V/T | 0.1327 | likely_benign | 0.1441 | benign | -1.587 | Destabilizing | 0.299 | N | 0.356 | neutral | None | None | None | None | N |
V/W | 0.8748 | likely_pathogenic | 0.8612 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/Y | 0.6274 | likely_pathogenic | 0.6373 | pathogenic | -1.218 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.