Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7475 | 22648;22649;22650 | chr2:178722364;178722363;178722362 | chr2:179587091;179587090;179587089 |
N2AB | 7158 | 21697;21698;21699 | chr2:178722364;178722363;178722362 | chr2:179587091;179587090;179587089 |
N2A | 6231 | 18916;18917;18918 | chr2:178722364;178722363;178722362 | chr2:179587091;179587090;179587089 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.206 | D | 0.398 | 0.295 | 0.176091768786 | gnomAD-4.0.0 | 1.59232E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86002E-06 | 0 | 0 |
T/S | None | None | 0.007 | N | 0.257 | 0.163 | 0.134241683229 | gnomAD-4.0.0 | 1.59236E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02737E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0999 | likely_benign | 0.0994 | benign | -1.147 | Destabilizing | 0.206 | N | 0.398 | neutral | D | 0.530099384 | None | None | N |
T/C | 0.4811 | ambiguous | 0.5166 | ambiguous | -0.848 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
T/D | 0.5326 | ambiguous | 0.5681 | pathogenic | -1.451 | Destabilizing | 0.837 | D | 0.528 | neutral | None | None | None | None | N |
T/E | 0.3493 | ambiguous | 0.3862 | ambiguous | -1.301 | Destabilizing | 0.945 | D | 0.518 | neutral | None | None | None | None | N |
T/F | 0.2131 | likely_benign | 0.2481 | benign | -0.988 | Destabilizing | 0.998 | D | 0.604 | neutral | None | None | None | None | N |
T/G | 0.3922 | ambiguous | 0.4059 | ambiguous | -1.518 | Destabilizing | 0.956 | D | 0.563 | neutral | None | None | None | None | N |
T/H | 0.2645 | likely_benign | 0.3017 | benign | -1.743 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
T/I | 0.1284 | likely_benign | 0.1569 | benign | -0.193 | Destabilizing | 0.9 | D | 0.507 | neutral | N | 0.52036518 | None | None | N |
T/K | 0.2853 | likely_benign | 0.3445 | ambiguous | -0.598 | Destabilizing | 0.96 | D | 0.513 | neutral | None | None | None | None | N |
T/L | 0.1101 | likely_benign | 0.1251 | benign | -0.193 | Destabilizing | 0.832 | D | 0.484 | neutral | None | None | None | None | N |
T/M | 0.0903 | likely_benign | 0.0944 | benign | -0.082 | Destabilizing | 0.994 | D | 0.579 | neutral | None | None | None | None | N |
T/N | 0.1694 | likely_benign | 0.1909 | benign | -1.143 | Destabilizing | 0.795 | D | 0.52 | neutral | N | 0.48866266 | None | None | N |
T/P | 0.7912 | likely_pathogenic | 0.7641 | pathogenic | -0.48 | Destabilizing | 0.965 | D | 0.569 | neutral | D | 0.531721251 | None | None | N |
T/Q | 0.2487 | likely_benign | 0.2861 | benign | -1.059 | Destabilizing | 0.988 | D | 0.563 | neutral | None | None | None | None | N |
T/R | 0.2073 | likely_benign | 0.2552 | benign | -0.686 | Destabilizing | 0.996 | D | 0.557 | neutral | None | None | None | None | N |
T/S | 0.1186 | likely_benign | 0.1288 | benign | -1.342 | Destabilizing | 0.007 | N | 0.257 | neutral | N | 0.462199523 | None | None | N |
T/V | 0.1063 | likely_benign | 0.1256 | benign | -0.48 | Destabilizing | 0.022 | N | 0.223 | neutral | None | None | None | None | N |
T/W | 0.6018 | likely_pathogenic | 0.6347 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
T/Y | 0.2871 | likely_benign | 0.3114 | benign | -0.729 | Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.