Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7477 | 22654;22655;22656 | chr2:178722358;178722357;178722356 | chr2:179587085;179587084;179587083 |
N2AB | 7160 | 21703;21704;21705 | chr2:178722358;178722357;178722356 | chr2:179587085;179587084;179587083 |
N2A | 6233 | 18922;18923;18924 | chr2:178722358;178722357;178722356 | chr2:179587085;179587084;179587083 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs774575742 | -1.089 | 0.01 | N | 0.29 | 0.275 | 0.264081493735 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3438 | ambiguous | 0.4041 | ambiguous | -0.906 | Destabilizing | 0.3 | N | 0.382 | neutral | None | None | None | None | N |
K/C | 0.6781 | likely_pathogenic | 0.7149 | pathogenic | -1.14 | Destabilizing | 0.995 | D | 0.519 | neutral | None | None | None | None | N |
K/D | 0.5152 | ambiguous | 0.5814 | pathogenic | -0.544 | Destabilizing | 0.329 | N | 0.425 | neutral | None | None | None | None | N |
K/E | 0.1289 | likely_benign | 0.1532 | benign | -0.37 | Destabilizing | 0.01 | N | 0.303 | neutral | N | 0.421888909 | None | None | N |
K/F | 0.7247 | likely_pathogenic | 0.7722 | pathogenic | -0.424 | Destabilizing | 0.944 | D | 0.528 | neutral | None | None | None | None | N |
K/G | 0.5205 | ambiguous | 0.5865 | pathogenic | -1.317 | Destabilizing | 0.495 | N | 0.449 | neutral | None | None | None | None | N |
K/H | 0.1848 | likely_benign | 0.2262 | benign | -1.54 | Destabilizing | 0.007 | N | 0.39 | neutral | None | None | None | None | N |
K/I | 0.3032 | likely_benign | 0.3442 | ambiguous | 0.192 | Stabilizing | 0.642 | D | 0.561 | neutral | N | 0.465890403 | None | None | N |
K/L | 0.3104 | likely_benign | 0.3574 | ambiguous | 0.192 | Stabilizing | 0.495 | N | 0.471 | neutral | None | None | None | None | N |
K/M | 0.1914 | likely_benign | 0.2107 | benign | -0.072 | Destabilizing | 0.944 | D | 0.486 | neutral | None | None | None | None | N |
K/N | 0.2669 | likely_benign | 0.3214 | benign | -0.957 | Destabilizing | 0.01 | N | 0.294 | neutral | N | 0.45057702 | None | None | N |
K/P | 0.9501 | likely_pathogenic | 0.963 | pathogenic | -0.146 | Destabilizing | 0.828 | D | 0.485 | neutral | None | None | None | None | N |
K/Q | 0.0817 | likely_benign | 0.0916 | benign | -0.936 | Destabilizing | 0.01 | N | 0.304 | neutral | N | 0.411346629 | None | None | N |
K/R | 0.0749 | likely_benign | 0.0812 | benign | -0.815 | Destabilizing | 0.002 | N | 0.275 | neutral | N | 0.428852167 | None | None | N |
K/S | 0.3002 | likely_benign | 0.3671 | ambiguous | -1.657 | Destabilizing | 0.329 | N | 0.398 | neutral | None | None | None | None | N |
K/T | 0.1158 | likely_benign | 0.1393 | benign | -1.256 | Destabilizing | 0.01 | N | 0.29 | neutral | N | 0.434911348 | None | None | N |
K/V | 0.2957 | likely_benign | 0.3384 | benign | -0.146 | Destabilizing | 0.704 | D | 0.531 | neutral | None | None | None | None | N |
K/W | 0.6827 | likely_pathogenic | 0.7496 | pathogenic | -0.296 | Destabilizing | 0.995 | D | 0.529 | neutral | None | None | None | None | N |
K/Y | 0.5218 | ambiguous | 0.5828 | pathogenic | 0.024 | Stabilizing | 0.893 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.