Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7486 | 22681;22682;22683 | chr2:178722331;178722330;178722329 | chr2:179587058;179587057;179587056 |
N2AB | 7169 | 21730;21731;21732 | chr2:178722331;178722330;178722329 | chr2:179587058;179587057;179587056 |
N2A | 6242 | 18949;18950;18951 | chr2:178722331;178722330;178722329 | chr2:179587058;179587057;179587056 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs879108235 | -0.832 | 0.99 | D | 0.504 | 0.469 | None | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0744 | likely_benign | 0.0744 | benign | -0.721 | Destabilizing | 0.007 | N | 0.113 | neutral | N | 0.456233556 | None | None | I |
S/C | 0.1263 | likely_benign | 0.1219 | benign | -0.451 | Destabilizing | 0.99 | D | 0.504 | neutral | D | 0.542112824 | None | None | I |
S/D | 0.5086 | ambiguous | 0.5355 | ambiguous | 0.173 | Stabilizing | 0.617 | D | 0.493 | neutral | None | None | None | None | I |
S/E | 0.5714 | likely_pathogenic | 0.5743 | pathogenic | 0.126 | Stabilizing | 0.617 | D | 0.46 | neutral | None | None | None | None | I |
S/F | 0.2485 | likely_benign | 0.2567 | benign | -1.088 | Destabilizing | 0.896 | D | 0.572 | neutral | N | 0.502359142 | None | None | I |
S/G | 0.0916 | likely_benign | 0.0967 | benign | -0.903 | Destabilizing | 0.4 | N | 0.473 | neutral | None | None | None | None | I |
S/H | 0.4189 | ambiguous | 0.4513 | ambiguous | -1.382 | Destabilizing | 0.992 | D | 0.501 | neutral | None | None | None | None | I |
S/I | 0.1659 | likely_benign | 0.168 | benign | -0.353 | Destabilizing | 0.021 | N | 0.342 | neutral | None | None | None | None | I |
S/K | 0.6722 | likely_pathogenic | 0.701 | pathogenic | -0.508 | Destabilizing | 0.617 | D | 0.458 | neutral | None | None | None | None | I |
S/L | 0.1036 | likely_benign | 0.1052 | benign | -0.353 | Destabilizing | 0.25 | N | 0.451 | neutral | None | None | None | None | I |
S/M | 0.2061 | likely_benign | 0.2213 | benign | -0.001 | Destabilizing | 0.92 | D | 0.515 | neutral | None | None | None | None | I |
S/N | 0.1678 | likely_benign | 0.1838 | benign | -0.316 | Destabilizing | 0.617 | D | 0.493 | neutral | None | None | None | None | I |
S/P | 0.515 | ambiguous | 0.5927 | pathogenic | -0.445 | Destabilizing | 0.896 | D | 0.512 | neutral | D | 0.53024954 | None | None | I |
S/Q | 0.4966 | ambiguous | 0.5218 | ambiguous | -0.566 | Destabilizing | 0.92 | D | 0.494 | neutral | None | None | None | None | I |
S/R | 0.5069 | ambiguous | 0.5284 | ambiguous | -0.358 | Destabilizing | 0.85 | D | 0.523 | neutral | None | None | None | None | I |
S/T | 0.0738 | likely_benign | 0.0805 | benign | -0.466 | Destabilizing | 0.002 | N | 0.106 | neutral | N | 0.491828997 | None | None | I |
S/V | 0.1717 | likely_benign | 0.1802 | benign | -0.445 | Destabilizing | 0.25 | N | 0.451 | neutral | None | None | None | None | I |
S/W | 0.4106 | ambiguous | 0.4243 | ambiguous | -0.995 | Destabilizing | 0.992 | D | 0.618 | neutral | None | None | None | None | I |
S/Y | 0.2481 | likely_benign | 0.252 | benign | -0.749 | Destabilizing | 0.896 | D | 0.578 | neutral | N | 0.515361289 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.